Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1868 161 9e-35 seq11508 123 2e-23 seq2569 100 2e-16 seq1005 93.3 4e-14 >seq1868 Length=114019 Score = 161 bits (178), Expect = 9e-35 Identities = 380/566 (67%), Gaps = 12/566 (2%) Strand=Plus/Plus Query 50988 AAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTC 51047 ||| || ||| ||| |||||||| ||||| || | || |||||||||| | || || Sbjct 69417 AAATTTTCGCGCACATCCCGCGTAATTCATGTATCGAATCTTGCCAAAAATCTCTCGCTC 69476 Query 51048 TTTGAACGGCCTGTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTAGG 51107 || | | ||||||| | || |||||||||||||| || || || || || || Sbjct 69477 CTTCCAGCCCATGTCGTGGATGCCACAAATTGACCACATGCAGCCTACGTATCCATTTGG 69536 Query 51108 ATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGTC 51167 ||| | ||||||| ||||| | ||||| || | || || |||| ||| || Sbjct 69537 ATCCCTGCCATCCATACTGTACTTGTCGTTGAGGTAAATTGCCGTTGCCAAGGCCTCCTC 69596 Query 51168 TGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCAT 51227 | | | | ||| || | |||||| || ||||| |||||||||||| |||||||||| Sbjct 69597 GGGAGTTTTTGACCACTCGAGAATTTTTTTCGCCCAATACATGCGCATGAAACCGTGCAT 69656 Query 51228 CTTGCC--CTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGTTTGG 51285 ||||| |||||| | ||||| || |||| |||||| | || ||||| || || Sbjct 69657 TTTGCCTTCTCGCACC--AGCTGGTTCTGCGCCGCGTTCCAGAGATCCTCGTGCGTGTG- 69713 Query 51286 CAACTTGC-CAGCTCTGTCA-AATTGTAAATGTATGAGCGATGATCGTATTTGTGTTGCT 51343 | ||| | || | ||| |||||| |||| | || | || | ||| || || Sbjct 69714 -AGCTTTCTCAAATTCCTCACGATTGTACATGTGAGCACGTTTGTCCTTTTTATGGGCCT 69772 Query 51344 CGATCGTTTCTTGAGCCCATTGTGGTGCGCCTTCAACACAGTCGTAGCGGTCGTTGTAGA 51403 | || || || ||||| | ||||||||||| | || ||| |||||||||| Sbjct 69773 TTAGAGTCTCCTGCGCCCAAGCGGATGCGCCTTCAATTCGATCATAGTTCTCGTTGTAGA 69832 Query 51404 AACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCGATGTATCTGTCCACAC 51463 | |||||||||||| || ||||| || || ||| || || | | | ||||| | Sbjct 69833 AGCAAAAATTGTCGCTCAACTCGCGTCGCACAACGGACTCCTCTACGAACACCTCCACGC 69892 Query 51464 TATCAGGATGCGAAGGCTTTAAGCTTAAT--ATCTTCAACACAACTCGCTGCACGGAAAT 51521 | | | |||| ||||| | | | || | | || |||||||||||||| Sbjct 69893 TCTTTGCATGC--TTGCTTTTGTGTCGCTGCACCTCGAGAATCACCCGCTGCACGGAAAT 69950 Query 51522 TTGGCCAAAGTGAAACCATGGTGACA 51547 ||||||||||||||| ||||||| Sbjct 69951 CATGCCAAAGTGAAACCACGGTGACA 69976 >seq11508 Length=54009 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || || | || |||||| ||||||| | || || ||| | || Sbjct 27154 AATGCAAATCTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTCGAGGCCTC 27095 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| |||||| ||||| || ||| |||||||| || || ||||| ||||| Sbjct 27094 TGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCA 27035 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || ||||| | || || | |||||| || |||||||| Sbjct 27034 GCAGCGACTCATCTTCGCTGGTAAACAGCTCGAGGACGGTCGCACGTTGTCTGATTACAA 26975 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || |||||||| || || || || || | || ||||||| Sbjct 26974 TATCCAGAAGGAATCCACCCTCCACTTGGTCCTCCGTCTGCGAGGAGG 26927 >seq2569 Length=108685 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| ||||| || ||| | || ||||| ||||||| |||| || ||| | Sbjct 43266 ACAATGCAAATCTTTGTGAAAACTCTAACGGGTAAGACCATCACCCTCGAGGTCGAGGCT 43207 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||||| | ||| || ||| |||||||| || ||||| || || Sbjct 43206 TCAGACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGAT 43147 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||| || || ||||| | || |||| ||||| || ||| ||| Sbjct 43146 CAGCAGCGATTGATTTTCGCTGGAAAACAGCTGGAGGATGGACGCACATTGTCCGACTAC 43087 Query 25176 AATATTCAAAAAG 25188 || || || |||| Sbjct 43086 AACATCCAGAAAG 43074 >seq1005 Length=228466 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || ||| ||||||| | ||||| ||| | || Sbjct 171741 ATGCAAATTTTCGTCAAGACCCTCACTGGAAAAACCATCACGTTGGAAGTTGAGGCTTCC 171800 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||| || ||| | ||| | |||| ||| ||||| || || ||||| || ||||| Sbjct 171801 GACAGCATTGAGAACGTCAAGGCTAAAATTCAG-GACAAGGAGGGAATTCCCCCAGACCA 171859 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | ||||| || || || || | || || | ||||| || ||| ||||| Sbjct 171860 ACAGCGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGGCGCACCCTGTCCGACTACAA 171919 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| ||| | || || Sbjct 171920 CATCCAGAAGGAGTCGACGCTCCATCTCGTCCT 171952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433264330033640