Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1257 277 2e-69 seq9977 100 3e-16 seq353 93.3 5e-14 >seq1257 Length=117934 Score = 277 bits (306), Expect = 2e-69 Identities = 321/432 (74%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 93114 CTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCT 93173 ||||||||| ||||| | ||| |||||||| || ||||| || | ||||| ||||| | Sbjct 89596 CTTCGTCTCTGGATATGAGCTCGTTGCTGAAGGTCAAACCGGGCATGAGTCCACGTTTTT 89537 Query 93174 TGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATG 93233 | ||||| || || | || || || ||| ||| || || ||||| || || ||||| | Sbjct 89536 TCAGCCAGAAAATGGCGGCGAAGCTGCCACTAAAGAAAATTCCTTCGACCGCAGCAAAGG 89477 Query 93234 CCACAATACGTTCGGCAAAATTTGCGGAATTACT----GCTGATCCATTTTAAAGCCCAA 93289 |||||| || ||||||||| | | ||| || | ||||||| || ||||||||| Sbjct 89476 CCACAACTCGCTCGGCAAAACTCG----ATTTCTCGTCGTTGATCCAGTTCAAAGCCCAA 89421 Query 93290 TCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCG 93349 | ||| || || || || || || ||||||| || ||||| || |||||||||| Sbjct 89420 TTGGCCTTCTTGGCAACGCACGGCAGGTTTTCGATGGCATTAAACAGAAAATCTCGCTCT 89361 Query 93350 TCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCC 93409 | ||| |||||||| || ||||| || || |||||||| || || |||||||| Sbjct 89360 GAAGGATCCTTGATGTATGTGTCAATTAAGAGGGAGTACATTTCCGAGTGTACATTCTCA 89301 Query 93410 ATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAAT 93469 ||||||| ||| |||||||||||| | | |||||| || | |||||| ||||| ||| Sbjct 89300 ATTGCAACTTGAAATCCGTAGAAAAAGCGAGCTTCGGTCACCTGCACCTCTTGGCTGAAT 89241 Query 93470 CTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGC 93529 | || ||||||||||| |||||||||||||| || || |||||||| |||| || ||| Sbjct 89240 CGTTCGACGAGATTTTCGTTGACTATACCATCAGAGGCGGCAAAAAATGCCAGTACATGT 89181 Query 93530 TTTATAAAATGT 93541 ||||| ||| Sbjct 89180 GAGATAAAGTGT 89169 Score = 109 bits (120), Expect = 6e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||| ||||||||||| || |||||||| || ||||| || |||||||||||||||||| Sbjct 89060 TTTGAGAGATCGACTTCCTCAACAGTCCAGAATGATGCCTCAGCTTTTTTGTACATATCC 89001 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || ||||| | ||||||| || | |||||||| | ||| || || || || | Sbjct 89000 CAAATGTCCGGCCATTGAATAGGCATGATGACAAACCTCCGAGGATTTTCCTTGAGCAGA 88941 Query 93701 GGCTCTAGTTGTGGGTCAAA 93720 ||||| | ||| || ||||| Sbjct 88940 GGCTCCATTTGAGGATCAAA 88921 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 92921 AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA 92980 ||||||||||| |||||||| ||||| ||| |||||| ||||||||| || | | Sbjct 89855 AATCTATCAGCCACAAATTCAATGTATTGACACATCAGTGTACAATTCATACCAATCATT 89796 Query 92981 CGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATT 93040 || || |||||||| || | || || | ||||||| ||||||| || || | |||| Sbjct 89795 TTAACGGGCAGAGCGTCAGTGAGAAATTCCTGCTCGATTGCAACGGCGTCCTTGATGATT 89736 Query 93041 TCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAG 93100 | |||| |||| ||||||||| | || | ||| |||| ||||| |||||| Sbjct 89735 GTAGTCACTCGTTCCTTTGATGGTTTTTGGATGATGTGTTTGAACATCAAGCAGGCAAAG 89676 Query 93101 TC 93102 || Sbjct 89675 TC 89674 >seq9977 Length=47541 Score = 100 bits (110), Expect = 3e-16 Identities = 83/99 (84%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 126271 GTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGGGT 126328 |||||||||| |||| ||||||||||||||||| |||||||||| |||||||||||| Sbjct 32248 GTTGGCCGAGCGGTCGAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCGTGGGT 32307 Query 126329 TCGAACCCCACACCT-GACAAATTATTATTGGAATTTTT 126366 ||||||||||||| | | ||||| || || |||||| Sbjct 32308 TCGAACCCCACACTTAGCAAAATTTTTTTTTTCATTTTT 32346 >seq353 Length=125597 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGGT 126328 |||||||||||| |||||||||||||||||||||| |||||||| || ||||||| Sbjct 65118 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTGAGAAGATCGTGGGT 65059 Query 126329 TCGAACCCCACACCTGACAAATTATT 126354 ||||| ||||||||| ||| || || Sbjct 65058 TCGAATCCCACACCTAGCAATTTTTT 65033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556776881077440