Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_008979.1 Length=4264 Score E Sequences producing significant alignments: (Bits) Value seq411 113 1e-21 seq4960 109 1e-20 seq4841 109 1e-20 seq9402 107 5e-20 seq11762 98.7 3e-17 seq4756 98.7 3e-17 seq7839 96.9 9e-17 seq7256 96.9 9e-17 seq11522 95.1 3e-16 seq8897 91.5 4e-15 seq1920 86.0 2e-13 seq7595 82.4 2e-12 >seq411 Length=210958 Score = 113 bits (124), Expect = 1e-21 Identities = 110/140 (79%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 3249 ACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTTTGGGTAAAAAT 3308 || || |||||||| ||||||||| || || ||||||| |||||||||||||| ||| Sbjct 74039 ACTCTCTCACCAAAATGAGAATGTCTAATCGTGTACATACATACATTTTTGGGTGCTAAT 74098 Query 3309 ATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAACACAACTGCACAG 3368 | ||| |||| ||| ||||| || | |||||| ||||| || |||| ||| |||| Sbjct 74099 AATGCCTTTCCTCACTATTGGTGTCG--CCACCAGCATGCACAT--ACACGACTACACAT 74154 Query 3369 CCTCACTTTGGTGAGAGTGT 3388 |||||||||||||||| || Sbjct 74155 TCTCACTTTGGTGAGAGAGT 74174 >seq4960 Length=26160 Score = 109 bits (120), Expect = 1e-20 Identities = 124/163 (76%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 3227 TATTCGCTCCATGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACAT 3286 |||| ||||| | | | || ||| | | | |||||||||||||||||||| ||||||| Sbjct 10115 TATTTGCTCCGAGGATACCCATACAGTCTGATCAAAGTGAGAATGTGTAGTCGTGTACAT 10056 Query 3287 TTATACA-TTTTTGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTA 3345 ||||| ||||||| | ||| ||| || || ||||||| ||| |||||||| Sbjct 10055 ACATACATTTTTTGGATTGTCATAATGCCTTCCATTACGATTG--GTGTCACCACCAGTA 9998 Query 3346 TGCATATAAACACAACTGCACAGCCTCACTTTGGTGAGAGTGT 3388 ||||||| |||| ||| ||| ||||||||||||||||||| Sbjct 9997 TGCATAT--ACACGACTATACATTCTCACTTTGGTGAGAGTGT 9957 >seq4841 Length=2839 Score = 109 bits (120), Expect = 1e-20 Identities = 89/107 (83%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 3246 CACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTTTGGGTAAA 3305 || ||||| ||||||||||||||||| |||||| ||||||| ||| |||||||||||| Sbjct 969 CATACACTCTCACCAAAGTGAGAATGCGTAGTCGTGTACATACATATATTTTTGGGTAAT 1028 Query 3306 AATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATAT 3352 |||| | | ||| | ||||||||| || | ||||||||||||||| Sbjct 1029 AATAGTACTTTTTAACACGATTGGTGTCG--CCACCAGTATGCATAT 1073 >seq9402 Length=15265 Score = 107 bits (118), Expect = 5e-20 Identities = 123/162 (76%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 3238 TGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTT 3297 |||||| || ||||| | |||||||||||||||||||||| |||| || ||||||||| Sbjct 13282 TGCACACTCATACACTCTTACCAAAGTGAGAATGTGTAGTCGTGTATATACATACATTTT 13223 Query 3298 TGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAAC- 3356 |||||| || || || |||| ||| ||| | || | ||||||||||| |||| || Sbjct 13222 TGGGTAGAATTAGGGCCTTTCCTCACCATTAGTGTCG--CCACCAGTATGCGTATACACG 13165 Query 3357 ACAAC-TGCACAGCCTCACTTTGGTGAGAGTGTGGGAGTGTG 3397 || || | |||| | ||| |||| || ||| ||||||| Sbjct 13164 ACTACATACACATTGTTACTGTGGTCAGCGTGGATGAGTGTG 13123 >seq11762 Length=19835 Score = 98.7 bits (108), Expect = 3e-17 Identities = 122/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 3238 TGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTT 3297 |||||| || ||||| |||||||||| ||||||||||||| |||| || ||||||||| Sbjct 9392 TGCACACTCATACACTCTCACCAAAGTAAGAATGTGTAGTCGTGTATATACATACATTTT 9451 Query 3298 TGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAAC- 3356 |||||| || || || ||| ||| ||| | || | ||||||||||| |||| || Sbjct 9452 TGGGTAGAATTAGGGC-CTTCCTCACCATTAGTGTCG--CCACCAGTATGCGTATACACG 9508 Query 3357 ACAAC-TGCACAGCCTCACTTTGGTGAGAGTGTGGGAGTGTG 3397 || || | |||| | ||| |||| || ||| ||||||| Sbjct 9509 ACTACATACACATTGTTACTGTGGTCAGCGTGGATGAGTGTG 9550 >seq4756 Length=31065 Score = 98.7 bits (108), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 3257 ACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTTTGGGTAAAAATATTGCATT 3316 |||||||||||||||||||||| ||||| | |||||||||||||| ||| ||| || Sbjct 12899 ACCAAAGTGAGAATGTGTAGTCGTGTACCTACATACATTTTTGGGTTGTCATAATGCCTT 12840 Query 3317 TCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAACACAACTGCACAGCCTCACTT 3376 || |||||||| || | ||||| ||||||||| |||| ||| ||| ||||||| Sbjct 12839 CCATTACGATTGGTGTCG--CCACCAATATGCATAT--ACACGACTATACATTCTCACTT 12784 Query 3377 TG 3378 || Sbjct 12783 TG 12782 >seq7839 Length=10135 Score = 96.9 bits (106), Expect = 9e-17 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 3246 CACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTTTGGGTAAA 3305 || ||||| ||||||||||||||||| |||||| ||||||| || |||||||||||| Sbjct 4074 CATACACTCTCACCAAAGTGAGAATGCGTAGTCGTGTACATACGTATATTTTTGGGTAAT 4133 Query 3306 AATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATAT 3352 ||| | | ||| | ||||||||| || | ||||||||| ||||| Sbjct 4134 GATAGTACTTTTAAACACGATTGGTGTCG--CCACCAGTATCCATAT 4178 >seq7256 Length=6105 Score = 96.9 bits (106), Expect = 9e-17 Identities = 88/109 (81%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 3246 CACACACTTTCACCAAAGTGAGAATGTGTA--GTCATGTACATTTATACATTTTTGGGTA 3303 || ||||| || | |||||||||||||||| ||| ||||||| |||||||||||||| Sbjct 4594 CATACACTCTCGCGAAAGTGAGAATGTGTATAGTCGTGTACATACATACATTTTTGGGTG 4653 Query 3304 AAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATAT 3352 | |||| | | ||| | ||||||||| || | ||||||||||||||| Sbjct 4654 ATAATAGTACTTTTTAACACGATTGGTGTCG--CCACCAGTATGCATAT 4700 >seq11522 Length=8029 Score = 95.1 bits (104), Expect = 3e-16 Identities = 121/165 (73%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 3238 TGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTT 3297 |||| | || ||||| || ||||||||||||||||||||| || |||| | ||||||| Sbjct 3580 TGCATACCCATACACTCTCTCCAAAGTGAGAATGTGTAGTCGTGCACATACACACATTTT 3639 Query 3298 TGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAACA 3357 | ||| || | | ||| | | | ||||| || | || ||||||||||||| || Sbjct 3640 GGAGTACCGTTAATTCCTTTTAACGCCATTGGTGTCGCCG--CCAGTATGCATAT--GCA 3695 Query 3358 CAACTGCACAGCCTCACTTTGGTGAGAGTGTGGGAGTGTGTGCAT 3402 ||| ||| | ||||||||||||||||| | || ||| ||| Sbjct 3696 TGACTCCACCTTCGCACTTTGGTGAGAGTGTATGGGTATGTACAT 3740 >seq8897 Length=23814 Score = 91.5 bits (100), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 3238 TGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTT 3297 |||| | || ||||||| |||||||||||||||||||| || |||| || ||||||| Sbjct 18296 TGCATACCCATACACTTTTTTCAAAGTGAGAATGTGTAGTCGTGCACATATACACATTTT 18355 Query 3298 TGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAACA 3357 | ||| ||| | | ||||| | | ||||| || | ||||| ||| ||||| || Sbjct 18356 GGAGTACCGATAATTCCTTTCAACGCCATTGGTGTCG--CCACCAATATCCATAT--GCA 18411 Query 3358 CAACTGCACAGCCTCACTTTGGTGAGAGTGT 3388 ||| ||| | ||||||||||||||||| Sbjct 18412 TGACTCCACCTTCGCACTTTGGTGAGAGTGT 18442 >seq1920 Length=23972 Score = 86.0 bits (94), Expect = 2e-13 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 3238 TGCACATGCACACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACATTTT 3297 |||| | || ||||| | ||||||||||||| ||||||| ||||||| | |||||| Sbjct 12158 TGCATACCCATACACTCCCGCCAAAGTGAGAATATGTAGTCGTGTACATACACACATTTG 12217 Query 3298 TGGGTAAAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATATAAACA 3357 | | | || | | ||||| | ||||| || | ||||||||||||||| | || Sbjct 12218 GGAGCACCGTTAATTCCTTTCAACGTCATTGGTGTCG--CCACCAGTATGCATAT-ACCA 12274 Query 3358 CAACTGCACAGCCTCACTTTGGTGAGAGTGT 3388 | ||| ||| | ||||||||||||||||| Sbjct 12275 CGACTACACTTTCGCACTTTGGTGAGAGTGT 12305 >seq7595 Length=54402 Score = 82.4 bits (90), Expect = 2e-12 Identities = 84/109 (77%), Gaps = 7/109 (6%) Strand=Plus/Minus Query 3249 ACACTTTCACCAAAGTGAGAATGTGTAGTCATGTACATTTATACA-----TTTTTGGGTA 3303 ||| | | |||||| ||||||||||||||| ||||||| ||||| |||||||| Sbjct 13135 ACAATCTGACCAAAATGAGAATGTGTAGTCGTGTACATACATACATACATTTTTTGGGGT 13076 Query 3304 AAAATATTGCATTTCAGCACGATTGGCGTGGTCGCACCAGTATGCATAT 3352 |||| ||| | ||| ||||||||| || | ||||||||||||||| Sbjct 13075 GTAATAATGCCTATCATCACGATTGGTGTCG--CCACCAGTATGCATAT 13029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13531015531160