Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1005 120 3e-22 seq11508 109 5e-19 >seq1005 Length=228466 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| |||||||| | || || || || ||||||||||| || Sbjct 171742 ATGCCTCCACGCAGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCA 171683 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || || |||||||| || |||| | ||||| ||||| ||| Sbjct 171682 GACAGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGA 171623 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| || || || | | ||||| ||||||| || ||| Sbjct 171622 GGAATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCG 171563 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | || | ||||| || ||||||||||| ||||| ||||||||| || Sbjct 171562 ACCTCGAGAGTGATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCATGCCT 171509 Score = 118 bits (130), Expect = 9e-22 Identities = 169/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 114147 TTACAAAT-ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTT 114205 ||||| || ||||||||| |||| | || ||||| | || || || || |||||||| Sbjct 172433 TTACAGATCACCGCCACGAAGTCGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTT 172374 Query 114206 GTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTG 114265 ||| || || ||| || |||||| ||||||||||| || |||| | ||||| || Sbjct 172373 GTAGTCAGACAGAGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTG 172314 Query 114266 GTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGT 114325 ||| || |||||||| || ||||| ||||| || | | || | | |||| | Sbjct 172313 GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGCTGTCAGA 172254 Query 114326 GGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || |||| ||| | || ||||| |||| ||||| |||||||| ||||| Sbjct 172253 GGCCTCAACTTCCAAGGTAATGGTCTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || ||||| | || || || || ||||||||||| || Sbjct 172198 ATTCCTCCACGCAGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCA 172139 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| ||||||||||| || |||| | ||||| ||||| || Sbjct 172138 GACAGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGT 172079 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| || || || | | ||||| ||||||| || ||| Sbjct 172078 GGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCG 172019 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | || | ||||| || ||||||||||| ||||| ||||||||| || Sbjct 172018 ACCTCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCATGCCT 171965 >seq11508 Length=54009 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| ||| Sbjct 27380 ATGCCTCCACGCAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 27439 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||| || || |||||||||||| | || || |||||||| ||||| Sbjct 27440 GAGAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGT 27499 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| |||||||| ||| || || | | ||| | || || | || ||| Sbjct 27500 GGGATGCCCTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCG 27559 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||||| || || || ||||||||||| || ||||| Sbjct 27560 ACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCAT 27609 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || || | || ||| ||||| | || || || || ||||||||||| ||| Sbjct 27836 ATTCCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 27895 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || || || || || || |||| || |||||||| ||||| Sbjct 27896 GAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGT 27955 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | |||| ||||| | | ||| Sbjct 27956 GGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCG 28015 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | ||| | || || ||||| |||||||| || ||||||||||| ||| Sbjct 28016 ACCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATTGCT 28069 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || || |||||||| || || ||| || || || ||||||||| Sbjct 26957 GTGGATTCCTTCTGGATATTGTAATCAGACAACGTGCGACCGTCCTCGAGCTGTTTACCA 27016 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || || ||||| |||||||| ||||| || Sbjct 27017 GCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTC 27076 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | || ||||| || | ||| | ||||| || || || ||| Sbjct 27077 ACGTTCTCGATCGTGTCAGAGGCCTCGACCTCAAGGGTGATGGTTTTACCCGTGAGGGTT 27136 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 27137 TTGACGAAGATTTGCAT 27153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420072668602272