Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2674 161 2e-34 seq1257 127 4e-24 >seq2674 Length=18091 Score = 161 bits (178), Expect = 2e-34 Identities = 331/487 (68%), Gaps = 4/487 (1%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 || || || || || ||||| || |||| | | ||| || || | ||||||||| | Sbjct 2952 GCAAGATTACACACTGCCACTTCATCCGGACTAGAGTATTGCACGACCTCGGTGCACAAA 2893 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 ||||||| |||||| ||||||| || || ||||| |||||| |||||| ||| ||| Sbjct 2892 TTACTGCTCTTGATTGTGCCCAAGTTTTGCTGATTCGACTTGCGATTGCAGTGGTCTTTG 2833 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGAC-GCTGTTCCAGAGGTC 244866 |||||||| || || || || || | ||| | ||| | || || |||||| | Sbjct 2832 TAGAGCATAAATGGTGTTCCAGTTTCAACCTGAGACTTGAGAATAGCCGT-CCAGAGATT 2774 Query 244867 CCTAGCCTTGACC-GTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | |||||||| | | | | | | | ||||| | |||||| | ||| || | Sbjct 2773 ACGAGCCTTGATTTGACGTACAAAC-TGGCCCTGCGACTCGTATTGCTCGTAGAGTCGAT 2715 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 |||||| ||||||| || | || || ||| || ||| |||||||| |||| Sbjct 2714 TAAACTCGTCGCCCCAGGTGTCTTGCAGACCCGGGGACTTGCACGGACACATGAGGCTCC 2655 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | || |||| ||| | | |||||| || | |||||||||||||| || | || | Sbjct 2654 AAATACCATCGTCTTTGGCACGCTGCATAAACAAATCGGGGATCCAGAGAGCGTAAAATA 2595 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 |||| | | | | ||| ||| ||| || || || | || || ||||| || || | Sbjct 2594 GGTCTCGCGCACGCGACTCTTCCTTGCCTGTATTTTTTCGCAAATCTAAAAACTCGAAAA 2535 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 || | ||||| ||||| | |||| || | ||| ||||| |||||||||||||||| Sbjct 2534 TATCAGCATGCCACGGCTCGAGATAGATGGCAAAGGCACCGGGTCGCTTGTTGCCTCCCT 2475 Query 245166 GGTCCAC 245172 | ||||| Sbjct 2474 GATCCAC 2468 >seq1257 Length=117934 Score = 127 bits (140), Expect = 4e-24 Identities = 281/416 (68%), Gaps = 14/416 (3%) Strand=Plus/Plus Query 42421 TACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCA 42480 ||||||| || || ||||||||||| || |||||||| || || || | | | |||| Sbjct 89186 TACTGGCATTTTTTGCCGCCTCTGATGGTATAGTCAACGAAAATCTCGTCGAACGATTCA 89245 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 ||||||||||| || || |||| |||||||| || || | || || |||| Sbjct 89246 GCCAAGAGGTGCAGGTGACCGAAGCTCGCTTTTTCTACGGATTTCAAGTTGCAATTGAGA 89305 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 | || ||||| || ||||| || | | |||| |||||| |||||| |||| Sbjct 89306 ATGTACACTCGGAAATGTACTCCCTCTTAATTGACACATACATCAAGGATCCTTCAGAGC 89365 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | ||||| || ||||| || | |||| ||| | |||||||| | |||| Sbjct 89366 GAGATTTTCTGTTTAATGCCATCGAAAACCTGCCGTGCGTTGCCAAGAAGGCCAATTGGG 89425 Query 42661 CGCTCAACTGGATCGA-GAGTCCCGACGCAACG---TTCGGCGAGAGGCTGGTAGCCTTT 42716 | | ||||||||| | || ||| | || || | |||| | | || |||||| Sbjct 89426 CTTTGAACTGGATCAACGA----CGAGAAATCGAGTTTTGCCGAGCGAGTTGTGGCCTTT 89481 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 | || ||||| || || ||||| ||| ||||||| |||| |||||||| || | Sbjct 89482 GCTGCGGTCGAAGGAATTTTCTTTAGTGGCAGCTTCGCCGCCATTTTCTGGCTGAA--AA 89539 Query 42777 AAGGTG---TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 || ||| || |||||||| | |||||| ||||| ||||| ||| ||||| Sbjct 89540 AACGTGGACTC-ATGCCCGGTTTGACCTTCAGCAACGAGCTCATATCCAGAGACGA 89594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944196888082560