Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1868 134 1e-26 seq11054 104 2e-17 seq5386 104 2e-17 seq1334 104 2e-17 seq11508 89.7 4e-13 seq1005 89.7 4e-13 >seq1868 Length=114019 Score = 134 bits (148), Expect = 1e-26 Identities = 296/433 (68%), Gaps = 27/433 (6%) Strand=Plus/Minus Query 37689 GACAATTTTTGCTTTTACACCAAGAGGTATGACTCTATCGAGGCTAGCGCACCTAACTGG 37748 |||||||||||||| |||| | ||| ||||| || || | ||||| | ||| Sbjct 69845 GACAATTTTTGCTTCTACAACGAGAACTATGATCGAATTGAAG---GCGCATCCGCTTGG 69789 Query 37749 GCGCTGATTACTCTTAAAGCGCACGAAAAAGAC---CGCAGACAATACGTTTATTCGCTT 37805 |||| | ||||| || || || |||| ||| || || | || | ||| | Sbjct 69788 GCGCAGGAGACTCTAAAGGCCCATAAAAAGGACAAACGTGCTCAC-ATGTACAATCG--T 69732 Query 37806 AAGGTGTTTGAAAACGCCGACACGCACGA---TCTCTTGTGGAACGCGGCTCAAATTCAG 37862 ||| ||||| || || |||||||||| ||||| |||||||||| || | ||| Sbjct 69731 GAGGAATTTGAGAAAGCTCACACGCACGAGGATCTCT---GGAACGCGGCGCAGAACCAG 69675 Query 37863 CTTGTGCGCGAGGGTAAGATGCATCAGTAT-ATGCGCATGTATTGGTGCAAGAAAATTTT 37921 || ||||| || || || ||||| | || | ||||||||||||||| || |||||| | Sbjct 69674 CTGGTGCGAGAAGGCAAAATGCA-CGGTTTCATGCGCATGTATTGGGCGAAAAAAATTCT 69616 Query 37922 GGAATGGTCTGATGATGCTCAGACCGCGCTCAACTAC-GCCATTTATCTCAATGATAAGT 37980 || ||||| | | | || || || | || || ||||| ||||| || |||| Sbjct 69615 CGAGTGGTCAAAAACTCCCGAGGAGGC-CTTGGCAACGGCAATTTACCTCAACGACAAGT 69557 Query 37981 ACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC 38040 |||| |||| || | ||||| || || ||||| ||||| ||||||| || || || Sbjct 69556 ACAGTATGGATGGCAGGGATCCAAATGGATACGTAGGCTGCATGTGGTCAATTTGTGGCA 69497 Query 38041 TACACGATAGAGCCT----GGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAAC 38096 | ||||| | | || || |||||| |||| ||||||||||| |||||||| Sbjct 69496 TCCACGACATGGGCTGGAAGGAGCGAGA----GATTTTTGGCAAGATTCGATACATGAAT 69441 Query 38097 TACAACGGATGTG 38109 ||| ||||||| Sbjct 69440 TACGCGGGATGTG 69428 >seq11054 Length=12756 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 8753 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 8812 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 8813 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 8852 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 8753 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 8812 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 8813 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 8852 >seq5386 Length=688 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 127 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 68 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 67 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 28 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 127 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 68 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 67 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 28 >seq1334 Length=11658 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 11376 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 11317 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 11316 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 11277 Score = 104 bits (114), Expect = 2e-17 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGT--AAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || || | |||||||||| Sbjct 11376 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGTGTACAATCTAAGGAA 11317 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 11316 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 11277 >seq11508 Length=54009 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || ||||| |||| |||||| ||| |||||||||||||||||| || | Sbjct 27839 CCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 27898 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | ||||| |||||||| ||||| ||||| |||||| || Sbjct 27899 AGAGTG-CGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGG 27957 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGC 34078 | || || |||||| || ||| ||| | | |||| | | || | | ||| Sbjct 27958 GATGCCTTCCTTGTCCTGGATCTTTGCCTTGA-CGTTCTCAATCGTGTCCGACGCCTCGA 28016 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || | || || || || ||||| || |||||||| || || |||||| Sbjct 28017 CCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 >seq1005 Length=228466 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | ||| ||||| || ||||| || || ||||||||| |||||||| || | | Sbjct 171511 CCTCCACGCAGACGCAGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171452 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || || | ||||| ||||| || |||| |||||||| || || Sbjct 171451 AGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 171392 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA-CTATCAGTAGATTCGCA 34079 | || ||| |||||| |||||| ||| | | |||| || || | || || Sbjct 171391 ATGCCCTCCTTGTCCTGAATTTTAGCCTTGACGTT-CTCAATGCTGTCGGAAGCCTCAAC 171333 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 ||| | || || || || || ||||||||||| |||||||| ||||| || Sbjct 171332 TTCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTT 171282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397004058628912