Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq11508 147 5e-30 seq1005 120 7e-22 >seq11508 Length=54009 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || || | ||||| ||| || || || || || ||||||| Sbjct 27838 TCCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 27897 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| ||||| || | || ||||| || |||||||| ||||||||| ||| Sbjct 27898 GAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGG 27957 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| || |||||||| || || || ||||| || || | || || || || Sbjct 27958 GATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGAC 28017 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| ||||||||||| ||||| || ||||| ||||||||| Sbjct 28018 CTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || ||||| | || || | ||||| || | || ||||| ||||| Sbjct 27647 TCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAA 27706 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || |||||| ||||| || |||||||| || ||||| || || Sbjct 27707 ATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTC 27766 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || ||||| || ||||| ||||| || || || || ||||| Sbjct 27767 TCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGACA 27826 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 27827 AAGATCTGCATT 27838 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || ||||| | || || | ||||| || | || ||||| ||||| Sbjct 27191 TCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAA 27250 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || |||||| || ||||| |||||||| ||||| || ||||| Sbjct 27251 ATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTC 27310 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | || || || || ||||| || || || || || || |||||| Sbjct 27311 TCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACG 27370 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 27371 AAAATCTGCAT 27381 >seq1005 Length=228466 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||| |||||||| | ||| || || ||||| || |||| Sbjct 171971 CATG-CCTCCACGCAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGT 171913 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| ||||| || | || ||||| ||||| |||| |||||||| | Sbjct 171912 CGGACAGGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGG---T 171856 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| ||||| || || ||||| ||||| || || ||||| || || ||| | Sbjct 171855 CTGGGGGAATTCCCTCCTTGTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAG 171796 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | |||||| || || || || || ||||||||||| || ||||| Sbjct 171795 CCTCAACTTCCAACGTGATGGTTTTTCCAGTGAGGGTCTTGACGAAAATTTGCAT 171741 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | || ||||| || ||||| | |||||| || || ||| Sbjct 172159 TCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAG 172100 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| || ||||||||| || || ||||||||||| || || |||||| Sbjct 172099 ATCAATCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTT 172040 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| | || || ||||| || || || || || |||||||| ||||| Sbjct 172039 TCAATAGTGTCGGAGGCCTCGACCTCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACA 171980 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 171979 AAGATCTGCAT 171969 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | || ||||| || || || | ||||| || || ||| Sbjct 171703 TCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAG 171644 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||||| || ||||| ||||| || || ||||||||||| || || ||| Sbjct 171643 ATCAATCGCTGCTGG---TCTGGAGGAATTCCCTCCTTGTCCTGGATTTTGGCCTTGACG 171587 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| |||| ||| | || || ||||| ||||| || || || |||||||| ||| Sbjct 171586 TTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTTTTACCAGTCAGAGTTTTG 171527 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 171526 ACAAAGATCTGCAT 171513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179472181733968