Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11508 122 9e-23 seq1005 120 3e-22 >seq11508 Length=54009 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| | || || ||||| | ||||| |||||||| |||||||| || | Sbjct 27611 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27670 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| | |||| || |||||||| ||||| |||| || ||||||||||| || || Sbjct 27671 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27730 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || | | || ||||| ||| ||| | ||| || || || || Sbjct 27731 ATGCCTTCCTTGTCCTGGA-TCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAAC 27789 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | ||||||||| || | ||||| || || || |||||| Sbjct 27790 TTCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGACAAAGATCTGCATT 27838 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || ||||| | || || ||||| | ||||| |||||||| |||||||| || | Sbjct 27155 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27214 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| | |||| || |||||||| ||||| |||| || ||||||||||| || || Sbjct 27215 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27274 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || ||||| || || || || |||||| ||| | || ||| ||| || || Sbjct 27275 ATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACC 27334 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||| || || || | ||||| |||||||| ||||| Sbjct 27335 TCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || || ||||||||||| || | || ||||| |||| Sbjct 27854 AGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 27913 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| | || || ||||| || || || || || ||||| || || Sbjct 27914 TCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCCTTCCTTGTCC 27973 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| || ||| | || || || || || || | || | |||| Sbjct 27974 TGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAGGGTGATGGTC 28033 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||| | |||||| |||||||| |||||| Sbjct 28034 TTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || |||||||| | | ||||| |||| || ||||| || || Sbjct 26957 GTGGATTCCTTCTGGATATTGTAATCAGACAACGTGCGACCGTCCTCGAGCTGTTTACCA 27016 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || ||||| || || || || ||| Sbjct 27017 GCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTC 27076 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || ||| ||| || || || | || | ||| || || || | ||| Sbjct 27077 ACGTTCTCGATCGTGTCAGAGGCCTCGACCTCAAGGGTGATGGTTTTACCCGTGAGGGTT 27136 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| ||||||||| Sbjct 27137 TTGACGAAGATTTGCATT 27154 >seq1005 Length=228466 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | || ||| || | ||||| ||||| || || ||||||||||| || | Sbjct 172424 ACCGCCACGAAGTCGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGA 172365 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| || || || || ||| | || | ||||||||||| || || Sbjct 172364 CAGAGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGG 172305 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || ||| | | ||| ||| || || Sbjct 172304 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAAC 172245 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | || | ||||||||| ||||| ||||| || |||||||||||| Sbjct 172244 TTCCAAGGTAATGGTCTTGCCAGTCAATGTTTTAACAAAAATTTGCATT 172196 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || ||||| | |||||| || || || |||||||| || | Sbjct 171967 CCTCCACGCAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171908 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| |||| || |||||||| || || |||| | ||||| ||||| || ||| Sbjct 171907 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGA 171848 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||| || || || || ||||| ||| || ||| | | || || || ||| Sbjct 171847 ATTCCCTCCTTGTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACT 171788 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||| || || || | || || |||||||||||||| Sbjct 171787 TCCAACGTGATGGTTTTTCCAGTGAGGGTCTTGACGAAAATTTGCAT 171741 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | ||||| || || ||||||||||| || | | |||||| | || || Sbjct 171721 ACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCC 171662 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| || || ||| | || | ||||||||||| ||||||||||| || || || || Sbjct 171661 AGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGG 171602 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| || || | || || ||| || || || | ||| | || || Sbjct 171601 ATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTTTTA 171542 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||| |||||| || || || ||||| Sbjct 171541 CCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | ||||| || || || |||||||| || | | ||| ||| | || Sbjct 171496 AGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCC 171437 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| |||| | ||||||||||| || ||||| || || || || Sbjct 171436 TCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 171377 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | | || || || ||||| | || | |||| Sbjct 171376 TGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAATGGTC 171317 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAAT 64449 || || || | ||||| || || || ||||| || || Sbjct 171316 TTACCAGTTAGTGTTTTAACAAAGATCTGCATGTTGAT 171279 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | | |||||| | ||||| || || || || Sbjct 172165 GTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGTTGTTTACCC 172106 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | ||||||||||| || || ||||| || || || || ||||| ||| Sbjct 172105 GCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTG 172046 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || ||| || || || | ||| | || || || |||| |||| Sbjct 172045 ACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTAATTGTTTTACCAGTCAGAGTT 171986 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 171985 TTGACAAAGATCTGCAT 171969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499569503528640