Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2109 149 1e-30 seq1257 104 4e-17 >seq2109 Length=239337 Score = 149 bits (164), Expect = 1e-30 Identities = 343/506 (68%), Gaps = 17/506 (3%) Strand=Plus/Minus Query 203832 CCTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGT 203891 |||| || || || || ||||| |||| || || | ||||| | || | ||| | Sbjct 131231 CCTT-GTTTTATCAACGGTGAATTGAAGTGCATTAGCCGCAGGTTTTGATCGTAAATAAT 131173 Query 203892 ACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA 203951 |||||||||| || || || | ||| |||| | ||||| || | || ||||| Sbjct 131172 ACATGCCGGTTTTAAGACCAAGATCCCATGCGTAAAAATGCATCGATGTCAACTTGCT-- 131115 Query 203952 CGTTG--GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-C 204008 ||||| || | |||||||||| ||||| ||||| ||||| || |||||| || | Sbjct 131114 CGTTGTAGGTTGTGCCATGTGAACATTCAGCGACTGAGACTGGTCAAT-AAAGGCTCCAC 131056 Query 204009 GATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGT 204068 |||| || ||||| || | ||| || || |||||||| ||||| || || ||| ||| | Sbjct 131055 GATCAGCTGCCATTTTTAGAATAGTTTTTTGCGAAATTTCCCAAACAGTTTTGTACAACT 130996 Query 204069 CTCTGGTGTGTTGAGGCACATCTTCC---CACGTCCTG-ATCGAGCCGTTGTCGGCCATC 204124 || || | | | || | |||| | ||||| | || || || | || ||| Sbjct 130995 CTTTGATTTCGTCGGGAA----TTCCGTTGATTTCCTGCACTGAACCATTTTTAGCAATC 130940 Query 204125 AGTCTCA-TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTG 204183 | | ||| ||||| | || || |||| | | | | | |||| | || | || || || Sbjct 130939 AAT-TCATTCCTCATATCATCGTCCCAGAGGTCGAGCTTGATTAAATCTCTCAAGAGATG 130881 Query 204184 GGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAA 204243 ||||| ||||| || || || || || || || | || | | | ||| | ||| | Sbjct 130880 AGGGTTAATGATTTGGAATTCGCCTGAGAGTACTCGACGCACGTAGATATTGCTTGTGTA 130821 Query 204244 TGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGC 204303 |||||||| | |||||||||||| | |||||| || || |||||| ||||| ||||| Sbjct 130820 CGGTTCGAAAGACTCGTTGTTGCCCATAATCTGCGCAGTCGAGGCCGTAGGCATAGGAGC 130761 Query 204304 CAGGAGCAGGGAGTTGCGCACACCGT 204329 || || || || || | ||| |||| Sbjct 130760 GAGCAGAAGTGAATTTCTCACGCCGT 130735 Score = 114 bits (126), Expect = 2e-20 Identities = 209/301 (69%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 205108 CAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTC 205167 ||| || ||| |||| | ||||| | ||| |||||||| ||||| ||| || | | Sbjct 130037 CAGACCCGGAGATTTGTGAGGACAAAAGAGACTCCACATCTCATCGTTTTTTACGCGATT 129978 Query 205168 CATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTA-ATTCCGTCGT 205226 |||||| || || ||||||||| ||||||| | ||||||||| | | ||| || | Sbjct 129977 CATAAAAAGATCCGGAATCCACAGGGCGTAAAATAAATCACGGGCACGGTACTCC-TCCT 129919 Query 205227 CTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAAC 205285 ||| ||| || ||||| |||| ||| | | | || |||||||| ||||| | Sbjct 129918 TGCCAGTGTTTTTCTTCAAATCCAAG-AAGTCAAATACATCCGCGTGCCATGGCTCGAGA 129860 Query 205286 CACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCG 205345 | || || | || || || |||||||| || ||||| ||||| || | | | | Sbjct 129859 TAAACTGCAAACGCTCCGGGTCTCTTGTTGCCGCCCTGATCCACGTAACGCGCCGTGTGG 129800 Query 205346 TTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCC 205405 || | || || ||||| |||||||||||||||| ||||| || | |||||||| | Sbjct 129799 TTATACACGCGAAGCATGGGCACCAGACCGTTGGATACTCCGTTTGTCCCGTTGATGGGC 129740 Query 205406 G 205406 | Sbjct 129739 G 129739 >seq1257 Length=117934 Score = 104 bits (114), Expect = 4e-17 Identities = 279/427 (65%), Gaps = 0/427 (0%) Strand=Plus/Minus Query 159947 TCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTG 160006 ||||| | || |||| ||||||| | | | | || ||||||| ||||| ||| Sbjct 89594 TCGTCTCTGGATATGAGCTCGTTGCTGAAGGTCAAACCGGGCATGAGTCCACGTTTTTTC 89535 Query 160007 AGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCC 160066 ||||| |||||||| || || || ||||| || || || || || || ||||| ||| Sbjct 89534 AGCCAGAAAATGGCGGCGAAGCTGCCACTAAAGAAAATTCCTTCGACCGCAGCAAAGGCC 89475 Query 160067 ACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCC 160126 || | | ||| ||||| | || ||| | | |||| | ||||| | ||| Sbjct 89474 ACAACTCGCTCGGCAAAACTCGATTTCTCGTCGTTGATCCAGTTCAAAGCCCAATTGGCC 89415 Query 160127 TTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACA 160186 ||||| || | |||||||| | |||| ||| ||||||| || |||| | Sbjct 89414 TTCTTGGCAACGCACGGCAGGTTTTCGATGGCATTAAACAGAAAATCTCGCTCTGAAGGA 89355 Query 160187 TCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCC 160246 |||||||| || |||| | ||||||||||| | ||| ||||| || || || Sbjct 89354 TCCTTGATGTATGTGTCAATTAAGAGGGAGTACATTTCCGAGTGTACATTCTCAATTGCA 89295 Query 160247 ATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGA 160306 | ||||| ||||||| | || || ||||||||| || |||| | || Sbjct 89294 ACTTGAAATCCGTAGAAAAAGCGAGCTTCGGTCACCTGCACCTCTTGGCTGAATCGTTCG 89235 Query 160307 CCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATG 160366 | ||||| | || || | || || | ||| ||||| || |||| || || ||||| Sbjct 89234 ACGAGATTTTCGTTGACTATACCATCAGAGGCGGCAAAAAATGCCAGTACATGTGAGATA 89175 Query 160367 AAATGTC 160373 || |||| Sbjct 89174 AAGTGTC 89168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795035370111360