Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2109 138 1e-27 >seq2109 Length=239337 Score = 138 bits (152), Expect = 1e-27 Identities = 706/1102 (64%), Gaps = 64/1102 (6%) Strand=Plus/Minus Query 109402 TTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATT 109461 || || || | ||||||||| || ||||| |||||| | ||||||||| | |||||| Sbjct 131188 TTTGATCGTAAATAATACATGCCGGTTTTAAGACCAAGATCCCATGCGTAAAAATGCATC 131129 Query 109462 GAAGAGAGTTTGGAAAGTGTCGGACTCTCCATA--AACAAGTTCATCGACTGAGACTGAT 109519 || | | ||| ||| || |||| |||| |||| |||||||||||| | Sbjct 131128 GATGTCAACTTGCTCGTTGTAGGTTGTGCCATGTGAACA--TTCAGCGACTGAGACTGGT 131071 Query 109520 CGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGA 109579 | || || ||||||||||| ||||| | | ||| ||||| ||||||||| | Sbjct 131070 CAATAAAGGCTCCACGATCAGCTGCCATTTTTAGAATAGTTTTTTGCGAAATTTCCCAAA 131011 Query 109580 CAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCA- 109638 |||| |||||||| | ||||| || |||||||| | ||| | || | || ||| Sbjct 131010 CAGTTTTGTACAACTCTTTGATTTCGTCGGGAATTCCGTTGATTTCCTGCACTGAACCAT 130951 Query 109639 --CCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGAT 109696 ||| ||| || || | |||| || | |||||| ||| ||| | | || Sbjct 130950 TTTTAGCAATCA--AT-TCATTCCTCATATCATCGTCCCAGAGGTCGAGCTTGATTAAAT 130894 Query 109697 C-GTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755 | |||| ||||| ||| | | ||||| || | ||| || || | |||| Sbjct 130893 CTCTCAA-GAGATGAGGGTTAATGATTTGGAATTCGCCTGAGAGTACTCGACGCACGTAG 130835 Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815 || || | ||||| ||||||||| |||| |||||||| | || || ||||| || || Sbjct 130834 ATATTGCTTGTGTACGGTTCGAAAGACTCGTTGTTGCCCATAATCTGCGCAGTCGAGGCC 130775 Query 109816 GTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCT--TCGTC--TTTACCCGCTC 109871 || ||||| ||||| | ||||| |||| | || | | | | ||| | || Sbjct 130774 GTAGGCATAGGAGCGAGCAGAAGTGAATTTCTCACGCCGTGCTGGGCGATTTTTTCCTTC 130715 Query 109872 ACGCATTGCGTCCCAATCATAACGACCACTAAATTT---AGTCTCACCA--TCCCACATA 109926 | ||| | |||| || |||| || | || ||||| ||||||||| Sbjct 130714 A---ATTTAG-CCCAGTC-------CCAC---ATGTCCGAG-GGCACCACGTCCCACATA 130670 Query 109927 TCTGGTTGAAGTACACC----CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 || || || | ||| |||| |||| ||||| | || |||| || | || Sbjct 130669 TCGTACTGGAGAATACCTTTGCTCA----CAGGGGAACCTTCATAAGTCTCATAAGTGCC 130614 Query 109983 CTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT 110042 | ||| || | ||| | |||| || || | | ||||| ||||||||| Sbjct 130613 TTTTTCCTTCGCGAGCTCACAACTCTCCTCGAGCGCGCCGTAGTACATCGTCTCAAAA-- 130556 Query 110043 ATGAGCATTCATGAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACA-AAGAATAA 110098 || ||| || |||| ||| ||||| | || || || | | | || || | || Sbjct 130555 ATTAGC-TTGTTGAGTTTCTGAGCTTCTTCGCTCTCAAATGG-ATATCGCAGGAGGAGAA 130498 Query 110099 ACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTC 110158 || |||| || |||||||||| || | ||||||||| || || ||| ||||| Sbjct 130497 ACGCATCAGCAAGACCCTGAATTCCAATACCAATGGGTCGGTGACGACGGTTTGAGCGCT 130438 Query 110159 GAGCAGTTTC--TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCAC 110216 ||| || | || |||||| || ||||| || || | ||| | || || Sbjct 130437 CAGC--TTCCGGTAATGGGTAACGATTTACATCGATAACTTTATCTAAATTTCTTGTGAC 130380 Query 110217 AGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT----GA 110272 | | |||||||| | | ||| || || | || || || |||| ||| ||| | Sbjct 130379 AATTCTCGTGATTGCCTTGAGCTTTTCAAAGTCAAAAGTCTTCGCCTCAGGATTCACAAA 130320 Query 110273 CATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGT 110332 ||||||| | ||||||||| |||||||| || || | || ||| | |||| Sbjct 130319 CATATTT----ACAGCAATAGAAGCAAGATTACAAACCGCGACTTCATCTGAATTCGTGT 130264 Query 110333 ATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCG 110392 | | | ||||| || ||||| ||| || ||| |||||||||| ||| || | Sbjct 130263 ACTGGATGATTTCTGTGCACAAATTGCTGCTTGAAATCGTTCCCAAGTTCTGCTGGTTGG 130204 Query 110393 ATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACT 110452 |||| || || ||||| |||||||||||||| || |||||||| ||| |||| Sbjct 130203 ATTTACGATTACAATGGTCCTTGTAGAGCATGTATGGCGTTCCAGTTTCGACCTGAGACT 130144 Query 110453 TGAGAATGGCCTTCCATACATC 110474 |||| || || |||| | ||| Sbjct 130143 TGAGGATAGCTGTCCAGAGATC 130122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588887241316800