Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq11508 168 1e-36 seq1005 152 1e-31 >seq11508 Length=54009 Score = 168 bits (186), Expect = 1e-36 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||| | || ||| | ||||| |||||||| || ||||| ||||| |||| ||||| Sbjct 27844 TCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGT 27903 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || || ||||||||||| || || ||||| ||||| ||||| || || || ||||| Sbjct 27904 GCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCC 27963 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || ||| ||||||||||||||| |||||||| || || ||||| Sbjct 27964 TTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAG 28023 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || | |||||| ||||| | |||||| Sbjct 28024 GGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Score = 150 bits (166), Expect = 4e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || ||||||||||| || || || ||||| |||| ||||| | ||||| || Sbjct 27400 AACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTC 27459 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||| ||||| ||||| || ||||| ||||| || || || ||||| ||||||||||| Sbjct 27460 GAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTG 27519 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| |||||| || || || || ||||| || || || ||||| | || || Sbjct 27520 AATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTT 27579 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | |||||||| || | ||||||| Sbjct 27580 ACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||||||||| || ||||| || | || ||||| || || ||| Sbjct 27173 ACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCG 27232 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || ||||| || |||||||| || ||||| |||||||| || Sbjct 27233 AGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGG 27292 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| |||||||| || ||||| || || || |||||||| | || || Sbjct 27293 ATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATGGTTTTA 27352 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 27353 CCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 Score = 136 bits (150), Expect = 9e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||| || || || ||||||||||| | | || | || || |||||||| Sbjct 26950 GTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGACAACGTGCGACCGTCCTCGAGCTG 27009 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| |||||||| ||||| || |||||||| || ||||| |||||||| || || || Sbjct 27010 TTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTT 27069 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| |||||||| || ||||| || || || |||||||| | || || || || Sbjct 27070 CGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACCTCAAGGGTGATGGTTTTACCCGT 27129 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| ||||| | ||||||| Sbjct 27130 GAGGGTTTTGACGAAGATTTGCATT 27154 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||||||||| || ||||| || | || ||||| || || ||| Sbjct 27629 ACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCG 27688 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || ||||| || |||||||| || |||||||| ||||| || Sbjct 27689 AGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGG 27748 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| ||||| || ||||| ||| || ||||| || || | ||||| Sbjct 27749 ATCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTCTTG 27808 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | ||||| || || | |||||| Sbjct 27809 CCCGTGAGGGTTTTGACAAAGATCTGCATT 27838 >seq1005 Length=228466 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||| || || || ||||| |||| || || | |||||| ||| Sbjct 171493 ACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCCTCG 171434 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | ||| || |||||||| |||||||| || ||||| ||| Sbjct 171433 AGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 171374 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||||||||||||| |||| ||| || ||||| | ||||| ||||| Sbjct 171373 ATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAATGGTCTTA 171314 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 171313 CCAGTTAGTGTTTTAACAAAGATCTGCAT 171285 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||| || ||||| ||||| || | ||||| | ||||||||||| || Sbjct 172399 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCTTCGAGTTGT 172340 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | ||| || |||||||| |||||||| || ||||| || || || Sbjct 172339 TTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTA 172280 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||||||||| ||| |||| || || ||||| | ||||| ||||| || ||| Sbjct 172279 GCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATGGTCTTGCCAGTC 172220 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || | ||||||| Sbjct 172219 AATGTTTTAACAAAAATTTGCATT 172196 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || || ||||| || || || ||||| |||| || || | ||| || ||| Sbjct 171949 ACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCCTCG 171890 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||| || | ||| ||||||||||| ||||| || || ||||| ||| Sbjct 171889 AGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGA 171830 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||||||||||||| |||| ||| || ||||| | || | || ||| Sbjct 171829 ATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGTGATGGTTTTT 171770 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 171769 CCAGTGAGGGTCTTGACGAAAATTTGCAT 171741 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || ||||| ||||| || | || || | ||||| || ||||| Sbjct 171715 TGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGT 171656 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | ||| || |||||||||||||| || || ||||| || ||||| Sbjct 171655 TTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGATTTTG 171596 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| ||||| ||||| || || || || || || | || || || ||| Sbjct 171595 GCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTTTTACCAGTC 171536 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | ||||| Sbjct 171535 AGAGTTTTGACAAAGATCTGCAT 171513 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || ||||| ||||| || | || || | ||||||||||| || Sbjct 172171 TGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGTTGT 172112 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | ||| || |||||||| || || || || ||||| || ||||| Sbjct 172111 TTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATTTTG 172052 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| ||||| ||||| || || || || || |||| || || || ||| Sbjct 172051 GCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTAATTGTTTTACCAGTC 171992 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | ||||| Sbjct 171991 AGAGTTTTGACAAAGATCTGCAT 171969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109310221150952