Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq11508 127 2e-24 seq1005 105 5e-18 >seq11508 Length=54009 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||||| || ||| ||| || ||||| ||||| || || ||| | || Sbjct 27848 AGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGG 27907 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| ||||||||||||||||||| || | ||| ||| Sbjct 27908 CCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCCTTCC 27967 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || |||||||| ||||| | || Sbjct 27968 TTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAGGGTG 28027 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | |||||| || ||||||||||| Sbjct 28028 ATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCAT 28065 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||||||||| || ||||| || || || ||| |||| || Sbjct 27173 ACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCG 27232 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||||||||| || || | || | |||||| ||||| Sbjct 27233 AGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGG 27292 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||||| | | | || || ||||| ||||| | || || ||||| Sbjct 27293 ATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATGGTTTTA 27352 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||||| || ||||||||||| Sbjct 27353 CCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || || || ||||| || || ||| | ||| | || || | ||| Sbjct 27406 ATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCGAGCTG 27465 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||| || || || |||||||||||||||| || | |||||| ||||| ||| || Sbjct 27466 TTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTGAATTTT 27525 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | | || || ||||| ||||| | || || ||||| ||||| Sbjct 27526 GGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTTACCCGT 27585 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||||||||||| || ||||| Sbjct 27586 GAGGGTTTTTACAAAGATTTGCAT 27609 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| || || ||||||||| || ||||| || || || ||| |||| || Sbjct 27629 ACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCG 27688 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||||||||| || || | || | ||| |||||||| Sbjct 27689 AGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGG 27748 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | || || ||||| || |||| || || || || Sbjct 27749 ATCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTCTTG 27808 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||||| ||||| |||||||| Sbjct 27809 CCCGTGAGGGTTTTGACAAAGATCTGCAT 27837 >seq1005 Length=228466 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || ||||| || || ||| || ||||| ||||| ||||| || | || Sbjct 171730 AGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 171671 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| ||||| ||||| |||| |||||| || || | |||| |||||| Sbjct 171670 CCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCC 171611 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | || || || ||||| ||||| | || Sbjct 171610 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTG 171551 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||| |||||| ||||| |||||||| Sbjct 171550 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 || ||||| | || || | |||||||| || || ||| || ||||| ||||| ||| Sbjct 172426 TCACCGCCACGAAGTCGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCA 172367 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || ||| | || | || || | || ||||| ||||| |||| |||||| || || | | Sbjct 172366 GACAGAGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGG 172307 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 |||| |||||||||||| ||||| || || | | || || ||||| Sbjct 172306 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCA 172247 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| ||||| || || || ||||| ||||| |||||||| ||||| Sbjct 172246 ACTTCCAAGGTAATGGTCTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| || || ||| || ||||| ||||| ||||| || | || Sbjct 172186 AGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 172127 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || ||||| ||||| |||| |||||| || || | || | |||||| Sbjct 172126 CCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCC 172067 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | || || || ||||| ||||| | ||| Sbjct 172066 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTA 172007 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || |||| |||||| ||||| |||||||| Sbjct 172006 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380881627886088