Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1005 109 1e-18 seq11508 102 2e-16 >seq1005 Length=228466 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| || || ||||| | || | ||| || || || || ||||| | || || Sbjct 172186 AGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 172127 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 |||| || | ||||||||| |||||||| |||| ||| || || ||||| ||||| || Sbjct 172126 CCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCC 172067 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || || || ||||| || || || |||| || || | || || || |||||| Sbjct 172066 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTA 172007 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||||||||| | ||||| | ||| |||||||| Sbjct 172006 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| || |||||||| | || | ||| || || || || ||||| | || || Sbjct 171730 AGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 171671 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 |||| |||| |||||||| |||||||| |||| ||| || || || || ||||| || Sbjct 171670 CCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCC 171611 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || || || ||||| || || || |||| || || | || || || ||||| Sbjct 171610 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTG 171551 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||||||||| | ||||| | ||| |||||||| Sbjct 171550 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 >seq11508 Length=54009 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| | || | ||| | ||| | ||| || ||| || || || || | || || Sbjct 27392 AGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGA 27451 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 |||| || | ||||||||||| || |||| || ||||||||| ||||| || || ||| Sbjct 27452 CCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCT 27511 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || ||||| ||||| || ||||| || | ||| || | || || || || || Sbjct 27512 TTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTG 27571 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||||||||| || | ||||| | ||| || |||||| Sbjct 27572 ATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984327929835600