Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1005 96.9 6e-15 seq11508 95.1 2e-14 >seq1005 Length=228466 Score = 96.9 bits (106), Expect = 6e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 || || || || ||||| | || | ||| || ||| || || || || | | || Sbjct 172186 AGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 172127 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || || | ||||||||| ||||| || |||| ||| ||||| ||||| ||||| || Sbjct 172126 CCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCC 172067 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 || || || ||||| || || || ||||| || || | || || || |||||| Sbjct 172066 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTA 172007 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||||||||| | ||||| | || |||||||| Sbjct 172006 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 || || || |||||||| | || | ||| || ||| || || || || | | || Sbjct 171730 AGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 171671 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || |||| |||||||| ||||| || |||| ||| ||||| || || ||||| || Sbjct 171670 CCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCC 171611 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 || || || ||||| || || || ||||| || || | || || || ||||| Sbjct 171610 TTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTG 171551 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||||||||| | ||||| | || |||||||| Sbjct 171550 ATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 >seq11508 Length=54009 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||||||||| ||||||| || |||||| || ||||| || || ||||| ||||| ||| Sbjct 27464 TGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTGAATT 27523 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || ||||| || ||||| || | || || || || || ||||||||||| Sbjct 27524 TTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTTACCC 27583 Query 172044 GTTAATGTTTTAATGAATATCTGCATT 172070 || | ||||| | || || |||||| Sbjct 27584 GTGAGGGTTTTTACAAAGATTTGCATT 27610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904999596004800