Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2674 107 6e-18 seq8735 100 8e-16 seq3374 86.0 2e-11 >seq2674 Length=18091 Score = 107 bits (118), Expect = 6e-18 Identities = 302/463 (65%), Gaps = 3/463 (1%) Strand=Plus/Minus Query 155911 CACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACT 155970 |||||| |||||| | ||| ||| | ||| || || ||||| | || |||| Sbjct 2636 CACGCTGCATAAACAAATCGGGGATCCAGAGAGCGTAAAATAGGTCTCGCGCACGCGACT 2577 Query 155971 CCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCT 156030 | || | ||| ||| || || | ||||| || || |||||||| ||| |||| Sbjct 2576 CTTCCTTGCCTGTATTTTTTCGCAAATCTAAAAACTCGAAAATATCAGCATGCCACGGCT 2517 Query 156031 CCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAG 156087 | ||||| || ||||| ||| | |||| || |||||||| || || || |||| Sbjct 2516 CGAGATAGATGGCAAAGGCACCGGGTCGCTTGTTGCCTCCCTGATCCACGTAGCGTGCAG 2457 Query 156088 TCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAA 156147 | || ||||| |||| ||||| |||| | |||||||| |||| || || |||| Sbjct 2456 TATTGTTGAATACACGCAGCATGGGAACTAGGCCATTGGACAGGCCAGATGTGCCACGAA 2397 Query 156148 TATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAG 156207 | ||||| || || ||||| | || | | || ||||||||||| | || Sbjct 2396 TTTGCGAGCCTTTTGCGCGAATACAGTGCACACTAAGGCCAATACCACCGGCAGTCTTGC 2337 Query 156208 AAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTG 156267 |||| |||| || ||||| |||| | |||| || || || || || ||| | Sbjct 2336 TAATTAGAGCACAGCGCTTTAGTGTATCGTAAATGCCGTCCATGCTGTCGTCGGTCATGG 2277 Query 156268 ATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTG 156327 || ||| |||| | | ||| | || ||||| | ||| || || || || | Sbjct 2276 TCAGGAGAAAGCAGCTAGACATTTGTTGACGAGGTGTGCACGCGGCAAAAAGCGTTGGCG 2217 Query 156328 TTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC 156370 ||||| ||||||| || | |||| ||| ||||| ||||| Sbjct 2216 AGGCATGTGTAAAATATTTTTCCGACAAATACTCGTACGTCTC 2174 >seq8735 Length=53055 Score = 100 bits (110), Expect = 8e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| | ||||||||| |||||||||||| | || |||||||||||| Sbjct 4741 TCCATAGCCTTGATAAGACGACGCTGGATATAACCAGTTTCCGCAGTCTTTACAGCTGTA 4682 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAA 302669 ||||| ||||| ||||||| |||||||| ||||| Sbjct 4681 TCAATGAGACCCTCACGACCTCCCATAGCGTGGAA 4647 >seq3374 Length=26708 Score = 86.0 bits (94), Expect = 2e-11 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || |||||||| ||||| ||||| ||||||||||| |||||||| | || || || Sbjct 11768 ATTGTCATACGGGACGGAATGGCATGAGGATTGATGATAATGTCGGGCGTGAGGCCCTC- 11710 Query 251905 GCA-GTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATAGTTCCCTTT-TGTCCGT 251962 ||| ||||| ||||| |||| | | | ||| || | | | || | ||||| || |||| Sbjct 11709 GCAGGTGAACGGCATGTCCTCCTGC-CGATACTGAATGCCACAGGTACCTTTCTGCCCGT 11651 Query 251963 GACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTAC 252022 | ||||| || ||||| ||||| || | ||||| |||| |||| ||| | Sbjct 11650 GTCGAGAGGCAAATTTATCGCCAATCTGCGGTATTCTCACACTGCGAACTCGAATCTTGC 11591 Query 252023 AGAAGTTGTAACCATCACCGTTG 252045 |||| || || ||||| | |||| Sbjct 11590 AGAATTTATAGCCATCGCTGTTG 11568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471590252014872