Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3539 206 2e-48 seq11508 95.1 1e-14 seq2569 84.2 2e-11 >seq3539 Length=271623 Score = 206 bits (228), Expect = 2e-48 Identities = 312/444 (70%), Gaps = 0/444 (0%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 |||||||| |||| ||| |||| |||||||| || | | || || |||| Sbjct 168681 GGCGGGTTCTTCAAGATGTAGGTATTGAGCTTGTGGTTGCTCTCAAGTAGACCATGATGG 168622 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||| ||||| |||| ||| | || ||| ||||| ||| |||| |||||||| Sbjct 168621 CCGCAGGCTTTACAGCTCTGCGATATGATGCCTTTTTTTGCGCTGACGACAAGCTCAGTT 168562 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 ||||| ||||| || | |||||||||||| | || ||||| || || || |||| || Sbjct 168561 TCCGGATTGTCGCAAGCTGGACACAACACATATTTACGGATAAATCCGTCCAGCAAATCT 168502 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443 || | |||| | || || ||||| || ||||| |||| ||||| || |||| | Sbjct 168501 TGAAGCTTAGTTGCCTCATGCGAGCCATTAACGATAAATCTTTCGTGCTTAAAATCAAAT 168442 Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 || || || || |||| ||||| || || || |||||||| || | || || | ||| Sbjct 168441 TGAGTCTGTGCTCCCAATTCGCAGCCAAAATATTTTGTCGGATATGTAGCAGGTCTCCCA 168382 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | || || || | ||| |||||| |||||||| || || || || ||||| || ||| Sbjct 168381 ATGGCTTTTGCCACTTCCACCATGTTTACGATGACTGTTTTAATTCCATTGCCTTTACCT 168322 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || || || || || |||||||||||||| || || || || || |||| ||| Sbjct 168321 TCAACTTTTGCCTGAATACGCGGCATTTTGTAACGATAAAATGCATCGCTCACACCGCGA 168262 Query 34624 TTAACGTTCACAGTCCCCATCGTG 34647 || || || ||| | ||||||||| Sbjct 168261 TTTACATTTACACTGCCCATCGTG 168238 >seq11508 Length=54009 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||||||||| | || ||||| ||||| || | ||| ||| || Sbjct 27838 AATGCAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTC 27779 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | || ||| ||||| ||||| |||||| | || || || Sbjct 27778 CGACACAATCGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCA 27719 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || |||| |||| || || || ||||| ||||| | |||||| || |||| ||||| Sbjct 27718 GCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAA 27659 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| |||||||| || || | || |||| | | ||||||| |||| Sbjct 27658 CATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGAA 27609 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| ||||| | || || |||||||| ||| |||| ||| | Sbjct 27610 AATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTC 27551 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | || || || ||| |||||||| ||| | || |||||| Sbjct 27550 GGATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCA 27491 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| |||| |||| || ||||||||||| ||||||| | || | | || ||||| Sbjct 27490 ACAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAA 27431 Query 110452 CATTCAAAAAGAATCTAC 110469 ||| || || || || || Sbjct 27430 CATCCAGAAGGAGTCCAC 27413 >seq2569 Length=108685 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| |||||| |||| || || ||||| ||| |||| ||| || Sbjct 43264 AATGCAAATCTTTGTGAAAACTCTAACGGGTAAGACCATCACCCTCGAGGTCGAGGCTTC 43205 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || ||||| |||||||| || | ||| ||||| Sbjct 43204 AGACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGATCA 43145 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || | |||| || || |||||||||||||||| | ||| || | || ||||| Sbjct 43144 GCAGCGATTGATTTTCGCTGGAAAACAGCTGGAGGATGGACGCACATTGTCCGACTACAA 43085 Query 110452 CATTCAAAAAG 110462 ||| || |||| Sbjct 43084 CATCCAGAAAG 43074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412780940151608