Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq11508 113 4e-20 seq1005 91.5 1e-13 seq2569 86.0 5e-12 >seq11508 Length=54009 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||||||||| | || ||||| ||||| || | ||| |||||| Sbjct 27838 AATGCAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTC 27779 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | || ||| ||||| || || |||||| | || || || Sbjct 27778 CGACACAATCGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCA 27719 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| |||| |||| || || || ||||| ||||||| || ||| || |||||||||| Sbjct 27718 GCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAA 27659 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||| ||||| || | || |||| | | |||||||| |||| Sbjct 27658 CATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGAA 27609 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| |||||||| | || || |||||||| ||| | || ||||| Sbjct 27381 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCT 27322 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | ||||| ||||| || ||||| ||| | || || ||| Sbjct 27321 GACACGATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAG 27262 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| |||| |||| || || || ||||| ||||||| || ||| || ||||||||||| Sbjct 27261 CAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAAC 27202 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||| ||||| || | || |||| | | |||||||| |||| Sbjct 27201 ATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGAA 27153 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| ||||| | || || |||||||| ||| |||| ||||| Sbjct 27610 AATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTC 27551 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || || || ||| || ||||| ||| | || |||||| Sbjct 27550 GGATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCA 27491 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| |||| |||| || ||||||||||| ||||| | || | | |||||||| Sbjct 27490 ACAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAA 27431 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| || |||||||| || Sbjct 27430 CATCCAGAAGGAGTCCAC 27413 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || |||||| | || || || ||||| ||| | || ||||| Sbjct 28066 AATGCAGATTTTCGTGAAAACTCTCACCGGGAAGACCATCACCCTTGAGGTCGAGGCGTC 28007 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| || || |||||| | || |||||| Sbjct 28006 GGACACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGATCA 27947 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| |||| || | ||| || || ||||| ||||||| | || | | |||||||| Sbjct 27946 ACAGCGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTACAA 27887 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| |||||||| || | || |||| || | | ||||| |||| Sbjct 27886 CATTCAGAAGGAGTCCACCCTTCATTTGGTTCTGCGTCTCCGAGGTGGAA 27837 >seq1005 Length=228466 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| ||||| || || ||||| ||||||||| | ||| ||||| Sbjct 172196 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCTTGGAAGTTGAGGCCTC 172255 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || | ||| | || || ||||| || || || ||| | ||| || || Sbjct 172256 TGACAGCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 172315 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| || | || | |||||||||||| || || || | | || || | |||||||| Sbjct 172316 GCAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACTCTGTCTGACTACAA 172375 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||| |||||||| || Sbjct 172376 CATTCAGAAGGAGTCGAC 172393 >seq2569 Length=108685 Score = 86.0 bits (94), Expect = 5e-12 Identities = 135/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||| ||||| |||||| |||| || || ||||| ||| |||| |||||| Sbjct 43264 AATGCAAATCTTTGTGAAAACTCTAACGGGTAAGACCATCACCCTCGAGGTCGAGGCTTC 43205 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | || || ||||| || ||||| || | ||| ||||| Sbjct 43204 AGACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGATCA 43145 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| || | |||| || || |||||||||||||| | ||| || | |||||||| Sbjct 43144 GCAGCGATTGATTTTCGCTGGAAAACAGCTGGAGGATGGACGCACATTGTCCGACTACAA 43085 Query 107735 CATTCA-AAAGG 107745 ||| || ||||| Sbjct 43084 CATCCAGAAAGG 43073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398818192034584