Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1005 141 7e-29 seq11508 122 7e-23 seq2569 105 5e-18 >seq1005 Length=228466 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | || ||||| |||||||| || || || || || |||||||| || || | Sbjct 172196 TCCTCCACGCAGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGA 172137 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| ||||||||||| || ||| | ||||||| ||||| || || || Sbjct 172136 CAGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGG 172077 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || | ||| ||||| |||| | |||||| || || || Sbjct 172076 GATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGAC 172017 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 172016 CTCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||||||||| || || || || |||||||| || || | | ||||| | Sbjct 172411 CGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCA 172352 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||||||||| || ||| | ||||||| ||||| || || ||||| ||||| ||| Sbjct 172351 TCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTG 172292 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | ||||||| || ||||| | || || Sbjct 172291 TCCTGGATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATG 172232 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||||||| || ||||||||||| || |||||| Sbjct 172231 GTCTTGCCAGTCAATGTTTTAACAAAAATTTGCATT 172196 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || |||||| || | ||| || || || || || || ||||| || || | Sbjct 171511 CCTCCACGCAGACGCAGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171452 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| ||||| || || || || | ||||||| ||||| || || ||| Sbjct 171451 AGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 171392 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||| | ||||| | || | |||| ||| || || Sbjct 171391 ATGCCCTCCTTGTCCTG-AATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAAC 171333 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | || || || || ||||||| ||||||||||| |||||||| || Sbjct 171332 TTCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTT 171282 >seq11508 Length=54009 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| || || | ||| || ||||| || || || ||||| || || | Sbjct 27383 CCTCCACGCAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 27442 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| ||||| ||||| ||||| | || | || || |||||||| || Sbjct 27443 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGG 27502 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||||||||| |||||| | |||||| |||| | || || || || || Sbjct 27503 ATGCCCTCTTTGTCTTG-AATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGAC 27561 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || ||||| || || | |||||| ||||| || |||||| Sbjct 27562 CTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| || ||||| || || |||||||| || || || || ||||| | Sbjct 26927 CCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGAC 26986 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || ||||| ||||| ||||| | || | || ||||| || || || Sbjct 26987 AACGTGCGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGG 27046 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || || || | || | |||||||| || || Sbjct 27047 ATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACC 27106 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || ||||| || || | |||||| || || || |||||| Sbjct 27107 TCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATTTGCATT 27154 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||||||||| ||||| || || |||||||| || || | | ||||| Sbjct 27850 ACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCC 27909 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || || || ||| | |||| || || |||||||| || || || || || Sbjct 27910 GTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCCTTCCTT 27969 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| ||||| | || | ||||| || || || ||||| || || Sbjct 27970 GTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAGGGTGAT 28029 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || | ||||| || || ||||||||| Sbjct 28030 GGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | |||||| || |||| ||| || || || |||||||| ||||| || |||| Sbjct 27154 TCCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGA 27213 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| | || ||||| || || || || | |||| || ||||| || || || Sbjct 27214 CAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGG 27273 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || | || || || | || | |||||||| || || Sbjct 27274 GATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAAC 27333 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || ||||| || || | |||||| || || |||||||| Sbjct 27334 CTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 >seq2569 Length=108685 Score = 105 bits (116), Expect = 5e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29597 CTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 |||| || ||||| || || | ||||| |||| ||| || || ||||| ||||| | Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATG-TGCGTCCATCCTCCAGCTGTTTTCCAGCGAAA 43132 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 ||||||| |||||||| || ||||| ||||||||||| || | || |||||| || Sbjct 43133 ATCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTT 43192 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | ||||| ||| || || || || || || || || || |||| ||||| ||| Sbjct 43193 TCGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACA 43252 Query 29776 AATATCTGCATT 29787 || || |||||| Sbjct 43253 AAGATTTGCATT 43264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385162598779896