Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1868 123 5e-23 seq2569 87.8 4e-12 >seq1868 Length=114019 Score = 123 bits (136), Expect = 5e-23 Identities = 201/287 (70%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 198338 TCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAG 198397 ||| ||||| || |||| | ||| || | ||||||| |||||||| |||| | | Sbjct 69699 TCTCTGGAACGCGGCGCAGAACCAGCTGGTGCGAGAAGGCAAAATGCACGGTTTCATGCG 69640 Query 198398 AATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTA 198457 ||||| ||||| ||||| || || || ||| ||| ||| || || || || ||| | | Sbjct 69639 CATGTATTGGGCGAAAAAAATTCTCGAGTGGTCAAAAACTCCCGAGGAGGCCTTG-GCAA 69581 Query 198458 TAGTA-TCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAG 198516 | | | || || ||| | |||||| | || |||| |||||| || |||||||||| Sbjct 69580 CGGCAATTTACCTCAACGACAAGTACAGTATGGATGGCAGGGATCCAAATGGATACGTAG 69521 Query 198517 GTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTG 198576 | || |||||||| ||||| || | || || | ||||| || || || |||| Sbjct 69520 GCTGCATGTGGTCAATTTGTGGCATCCACGACATGGGCTGGAAGGAGCGAGAGATTTTTG 69461 Query 198577 GGAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGAT 198623 | ||||| |||| |||||||| | ||| | | | |||||||||| Sbjct 69460 GCAAGATTCGATACATGAATTACGCGGGATGTGCGCGAAAATTTGAT 69414 >seq2569 Length=108685 Score = 87.8 bits (96), Expect = 4e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || || || || | | | || || || || ||||||||||| || | Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAA 43133 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | || || |||||||| || ||||| || || || || ||||| || || ||||||| Sbjct 43134 TCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTT 43193 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || || || || || || || | || || ||||| || || | || || |||| Sbjct 43194 CGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACAA 43253 Query 82801 ATATCTGCATT 82811 | || |||||| Sbjct 43254 AGATTTGCATT 43264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981675539606984