Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1868 123 5e-23 >seq1868 Length=114019 Score = 123 bits (136), Expect = 5e-23 Identities = 186/262 (71%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 183021 TCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACG 183080 ||| ||||| || | || | ||| || || ||||||| |||||||| |||| | || Sbjct 69699 TCTCTGGAACGCGGCGCAGAACCAGCTGGTGCGAGAAGGCAAAATGCACGGTTTCATGCG 69640 Query 183081 AATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTA 183140 ||||| ||||| ||||| || || || ||| ||| |||||| || || || ||| | | Sbjct 69639 CATGTATTGGGCGAAAAAAATTCTCGAGTGGTCAAAAACTCCCGAGGAGGCCTTG-GCAA 69581 Query 183141 TAGTA-TCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAG 183199 | | | || | ||| | |||||| | || || | |||||| || |||||||||| Sbjct 69580 CGGCAATTTACCTCAACGACAAGTACAGTATGGATGGCAGGGATCCAAATGGATACGTAG 69521 Query 183200 GTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTG 183259 | || |||||||| ||||| || | ||||| | | ||||| || || || |||| Sbjct 69520 GCTGCATGTGGTCAATTTGTGGCATCCACGACATGGGCTGGAAGGAGCGAGAGATTTTTG 69461 Query 183260 GAAAGATAAGATATATGAATTA 183281 | ||||| |||| |||||||| Sbjct 69460 GCAAGATTCGATACATGAATTA 69439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903275055932160