Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2674 98.7 2e-15 seq8735 84.2 5e-11 >seq2674 Length=18091 Score = 98.7 bits (108), Expect = 2e-15 Identities = 309/478 (65%), Gaps = 3/478 (1%) Strand=Plus/Plus Query 110681 TGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG 110740 ||| || ||||| ||| | | || |||||| | |||||| || ||| |||| || || Sbjct 2422 TGGCCTAGTTCCCATGCTGCGTGTATTCAACAATACTGCACGCTACGTGGATCAGGGAGG 2481 Query 110741 TAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGA 110797 || | || || | ||||| ||||||||||| || |||||| | ||||| || || Sbjct 2482 CAACAAGCGACCCGGTGCCTTTGCCATCTATCTCGAGCCGTGGCATGCTGATATTTTCGA 2541 Query 110798 ATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTA 110857 || ||||| | || |||||| ||| ||||| | || || || ||||||| Sbjct 2542 GTTTTTAGATTTGCGAAAAAATACAGGCAAGGAAGAGTCGCGTGCGCGAGACCTATTTTA 2601 Query 110858 TGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCT 110917 || | ||||| | ||||| || ||| | |||| |||| |||| || ||| || Sbjct 2602 CGCTCTCTGGATCCCCGATTTGTTTATGCAGCGTGCCAAAGACGATGGTATTTGGAGCCT 2661 Query 110918 TATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCT 110977 |||||||| || || ||||| || | || | |||||| | || Sbjct 2662 CATGTGTCCGTGCAAGTCCCCGGGTCTGCAAGACACCTGGGGCGACGAGTTTAATCGACT 2721 Query 110978 TTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTG 111037 ||||| |||| || | ||| ||||| ||||| |||| | || || Sbjct 2722 CTACGAGCAATACGAGTCGCAGGGCCAGTTTGTACGTCAAATCAAGGCTCGTAATCTCTG 2781 Query 111038 GTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCA 111097 | || || | || || |||||||||||||| || | ||| | || ||||| || Sbjct 2782 GACGGCTATTCTCAAGTCTCAGGTTGAAACTGGAACACCATTTATGCTCTACAAAGACCA 2841 Query 111098 TATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| || ||||| || || || ||||| ||| |||||||||||| Sbjct 2842 CTGCAATCGCAAGTCGAATCAGCAAAACTTGGGCACAATCAAGAGCAGTAATTTGTGC 2899 >seq8735 Length=53055 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 304988 AAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047 || || ||||||||||| ||||| || ||||| ||||| |||||||| |||||| |||| Sbjct 3165 AAGGGCAAAGAGGGTCGAATTCGTGGCAATCTCATGGGTAAACGTGTGGATTTTTCTGCA 3224 Query 305048 AGAAGTGTAATCACACCTGATTCT 305071 | | ||| |||||||||||| || Sbjct 3225 CGTACTGTCATCACACCTGATCCT 3248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186629475993816