Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2569 104 2e-17 seq11508 102 5e-17 seq1005 93.3 3e-14 >seq2569 Length=108685 Score = 104 bits (114), Expect = 2e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 |||| || |||||||| ||||| | ||||||| | || |||| |||||||| || |||| Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAA 43133 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 |||| |||||||||||| | || | || |||||||| || || | | |||| Sbjct 43134 TCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTT-GGCCTTGACATTT 43192 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | |||||| | || || || | ||||| || ||||| |||| ||||| ||| Sbjct 43193 TCGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACA 43252 Query 33739 AAGATCTGCATAGT 33752 ||||| ||||| || Sbjct 43253 AAGATTTGCATTGT 43266 >seq11508 Length=54009 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | |||| ||| || || ||||||||| |||||||| || || Sbjct 27611 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27670 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| || | || |||||||| ||||||| |||||||| ||| | || Sbjct 27671 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27730 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || ||| | ||| || | |||||| | || || Sbjct 27731 ATGCCTTCCTTGTCCTGGATCTTAGCTTTGA-CATTCTCGATTGTGTCGGAAGCCTCAAC 27789 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | ||||| |||||||||||||| Sbjct 27790 TTCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGACAAAGATCTGCAT 27837 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | |||||||| || ||| ||| || || |||||||| |||||| Sbjct 27839 CCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 27898 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | || ||||||||||| |||| ||||| ||||| | || Sbjct 27899 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGG 27958 Query 33643 ACACCTTCTTTGTC 33656 | ||||| ||||| Sbjct 27959 ATGCCTTCCTTGTC 27972 >seq1005 Length=228466 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| || || ||||| || || ||| || || |||||||| || || Sbjct 171739 CCTCCACGCAGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 171680 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || ||||| ||||| |||||||| ||| | || Sbjct 171679 AGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGA 171620 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | || || ||||| ||||| || | | | ||| |||||| | || || Sbjct 171619 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGTTTTCAATAGTGTCGGAGGCCTCGAC 171561 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| |||||||| || | ||||| |||||||||||||| Sbjct 171560 CTCGAGAGTGATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| || |||||||| || || ||| || || |||||||| || || Sbjct 172195 CCTCCACGCAGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 172136 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | |||||| || ||||| ||||| |||||||| ||| | || Sbjct 172135 AGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGG 172076 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | || || ||||| ||||| || | | | ||| |||||| | || || Sbjct 172075 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGA-CGTTTTCAATAGTGTCGGAGGCCTCGAC 172017 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| || | ||||| |||||||||||||| Sbjct 172016 CTCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 86.0 bits (94), Expect = 4e-12 Identities = 140/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| ||||| || || || | || || | || |||||||| || Sbjct 171476 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAA 171417 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||||| |||||||| ||| | || | || || ||||| |||||| || | | | Sbjct 171416 AATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATTTTAGCCTTGA-CGT 171358 Query 33678 AGTCACGG-TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| | || || || | || || || ||||| |||| ||||| | Sbjct 171357 TCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAA 171298 Query 33737 CAAAGATCTGCATAGTTG 33754 ||||||||||||| |||| Sbjct 171297 CAAAGATCTGCAT-GTTG 171281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328655702699520