Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq11508 109 1e-18 seq4210 86.0 1e-11 seq1005 84.2 5e-11 >seq11508 Length=54009 Score = 109 bits (120), Expect = 1e-18 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| ||||| || || || |||||| ||||||| || ||| ||| Sbjct 27834 CAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTCCGAC 27775 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| |||| || ||||| || ||| || || || ||||| || || ||| || Sbjct 27774 ACAATCGAGAATGTCAAAGCTAA-GATCCAGGACAAGGAAGGCATCCCACCAGACCAGCA 27716 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| || ||||||||||||||| | || || || || || || | || |||||| | Sbjct 27715 GCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAACAT 27656 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||| |||||||| || || || || || Sbjct 27655 CCAAAAAGAGTCGACCCTCCATCTGGT 27629 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| ||||| || ||||| ||||| | || || || |||||| Sbjct 27378 CAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCTGAC 27319 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || ||||| || || || ||| || Sbjct 27318 ACGATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAGCAG 27259 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| || ||||||||||||||| | || || || || || || | || |||||| || Sbjct 27258 CGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAACATC 27199 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || |||||||| || || || || || Sbjct 27198 CAAAAAGAGTCGACCCTCCATCTGGT 27173 >seq4210 Length=159020 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 |||||||||| ||||| || || || || || ||||||| ||| ||||| | ||| || Sbjct 117221 CGAAGTCTCAGTACAAGATGCAGCGTCGATTCCTTCTGGATATTGTAGTCGGACAATGTT 117162 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||||| ||||| || || |||| || ||| Sbjct 117161 CGACCATCTTCCAGCTGCTTACCGGCAAAAATCAGCCTCTGCTGA 117117 >seq1005 Length=228466 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || || || |||||||| || ||| ||| Sbjct 171288 CAGATCTTTGTTAAAACACTAACTGGTAAGACCATTACCTTGGAAGTTGAGGCTTCCGAC 171347 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | || || ||| || ||||| || || || || ||| || ||| || Sbjct 171348 AGCATTGAGAACGTCAAGGCTAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 171407 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || ||||||||||||||| | || ||||| | || || |||| |||||| || Sbjct 171408 CGATTGATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACAACATC 171467 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || || || || Sbjct 171468 CAGAAGGAGTCGACACTCCATCTCGT 171493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181638247095576