Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2109 163 3e-35 seq2674 111 1e-19 seq11508 104 2e-17 >seq2109 Length=239337 Score = 163 bits (180), Expect = 3e-35 Identities = 704/1092 (64%), Gaps = 31/1092 (3%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 ||||||||||| | || ||| || |||||||| | || | ||| |||||||| || || Sbjct 131218 ACGGTGAATTGAAGTGCATTAGCCGCAGGTTTTGATCGTAAATAATACATGCCGGTTTTA 131159 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| ||||| | ||| ||| || |||| ||| | | | || | ||| Sbjct 131158 AGACCAAGATCCCATGCGTAAAAATGCATCGATGTCAACTTGCTCGTTGTAGGTTGTGCC 131099 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT- 136817 | | || ||| ||||| || ||| || || | | ||| || || || ||||| || Sbjct 131098 ATGTGAACATTCAGCGACTGAGACTGGTCAATAAAGGCTCCACGATCAGCTGCCATTTTT 131039 Query 136818 -CAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 |||||| ||||||| |||||||||| | ||||| | | ||| |||| | | | Sbjct 131038 AGAATAGT--TTTTTGCGAAATTTCCCAAACAGTTTTGTACAACTCTTTGATTTCGTCGG 130981 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCAG 136936 ||||| | | ||| | ||| || || || || || || | || || | | |||| Sbjct 130980 GAATTCCGTTGATTTCCTGCACTGAACCATTTTTAGCAATCAATTCATTCCTCATATCA- 130922 Query 136937 TCG-AGTATACGTTGCTCTCTA-TGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 ||| | | || | || | | | | | || | |||||| | || | | ||| | Sbjct 130921 TCGTCCCAGAGGTCGAGCTTGATTAAATCTCTC-AAGAGATGAGGGTTAATGATTTGGAA 130863 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 |||||| || || |||| || ||||| | ||| || ||| |||| ||||| || ||||| Sbjct 130862 TTCGCCTGAGAGTACTCGACGCACGTAGATATTGCTTGTGTACGGTTCGAAAGACTCGTT 130803 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 ||| |||| |||||| ||||||| || || ||||| ||||| || | |||||| | Sbjct 130802 GTTGCCCATAATCTGCGCAGTCGAGGCCGTAGGCATAGGAGCGAGCAGAAGTGAATTTCT 130743 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGATTG 137174 | ||||| ||| | || || ||| | | ||||| ||||| ||| ||| | Sbjct 130742 CACGCCGTGCTGGGCGATTTTTTCCTTCAATTTAGCCCAGTCCCACA---TGTCCGAGGG 130686 Query 137175 GGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGA 137234 | | ||||| ||| |||| | || || || |||| || |||||| Sbjct 130685 CACCACGTCCCACATATCGTACTGGAGAATACCTTTGCTCACAGGGGAACCTTCATAAGT 130626 Query 137235 ATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTAAAT 137294 ||||| || || | ||||| || ||| ||||| | || ||||| ||||| || Sbjct 130625 CTCATAAGTGCCTTTTTCCTTCGCGAGCTCACAACTCTCCTCGAGCGCGCCGTAGTACAT 130566 Query 137295 AGTTTCGGAGATTTTTCTATTCAATTCTCT-AGCTTCTTGGCTGTCGTAGGGCATATCCA 137353 || || | ||| | || | || ||| |||||||| ||| || | || ||||| Sbjct 130565 CGTCTCAAAAATTAGCTTGTTGAGTT-TCTGAGCTTCTTCGCTCTCAAATGG-ATATCGC 130508 Query 137354 ATATAGCGAAA-GCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTTTAAAA 137412 | | |||| ||||| ||||| || ||||| || ||||| || |||| ||| | Sbjct 130507 AGGAGGAGAAACGCATCAGCAAGACCCTGAATTCCAATACCAATGGGTCGGTGACGACGG 130448 Query 137413 TTTGATATTTGAG----CGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTGAG 137468 ||||| | || || ||| || ||| ||| | || |||| | ||| | Sbjct 130447 TTTGAGCGCTCAGCTTCCGGTAA----TGGGTAACGATTTACATCGATAACTTTATCTAA 130392 Query 137469 ATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTTAGACTG 137528 ||| | || || | ||| | | | | |||| ||| || || || | || | || Sbjct 130391 ATTTCTTGTGACAATTCTCGTGATTGCCTTGAGCTTTTCAAAGTCAAAAGTCTTCGCCTC 130332 Query 137529 TTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGC--CGT-TTCTGT 137585 || |||| |||| || |||||||| || | || || || || | | |||| Sbjct 130331 AGGATTCACAAACATATTTACAGCAATAGAAGCAAGATTACAAACCGCGACTTCATCTGA 130272 Query 137586 ATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAAATT 137645 || ||| |||| || | ||||| | ||| | ||||||| || ||| |||||| || Sbjct 130271 AT--TCG-TGTACTGGATGATTTCTGTGCACAAATTGCTGCTTGAAATCGTTCCCAAGTT 130215 Query 137646 CTTTTGATTGTTTTTCTCGTTGAC-GTGATCTTTATATATCATATACGGAGTTCCGGTTT 137704 || || ||| ||| || | || || || || || | ||| || || ||||| |||| Sbjct 130214 CTGCTGGTTGGATTT-ACGATTACAATGGTCCTTGTAGAGCATGTATGGCGTTCCAGTTT 130156 Query 137705 CGACTTGAGTCT 137716 |||| |||| || Sbjct 130155 CGACCTGAGACT 130144 >seq2674 Length=18091 Score = 111 bits (122), Expect = 1e-19 Identities = 441/680 (65%), Gaps = 23/680 (3%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 ||||| || ||||| | ||| ||||| || || |||| || ||| ||||| || ||||| Sbjct 3870 ACGGTAAACTGGATAGCATTAGCGGCTGGCTTTGTTCGCAAATAATACATTCCAGTCTTG 3811 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGC---TCGGATCG 136755 | || |||||||| |||| ||| || |||| || | || | | || | | Sbjct 3810 AGCCCGAGCTCCCAGGCATAAAAATGCAT---TGACGTAAGTACATTGACTGTTGGCTGG 3754 Query 136756 GCCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATG 136815 | || ||||| ||||| || |||||| | | | ||| || ||||||||||| Sbjct 3753 CCGACATGTAGATTCAGCGACTGCGACTGATCAACAAATGCTCCACGATCTGCGGCCATT 3694 Query 136816 TTCAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 || || | | |||||| |||||||| |||| | |||| ||| | ||| || Sbjct 3693 TTTAAGATTTGCTTTTGCGAGATTTCCCACACGGTGCGATAGAGTGGCTTCA-ATTCTGC 3635 Query 136876 --GGAATTTCAT-CGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCAT-CATGAG 136931 ||||| | | | ||||| || || || || ||||| | || |||||| | | | Sbjct 3634 CGGGAAT--CGTGCAATATTTTGGACCGAGCCATTGTTGGCAA-GAATTTCATTCTTCAT 3578 Query 136932 ATCAGTCGAGT-ATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTT 136990 ||| ||| | | || | || | || | | || | |||| ||||||| || | Sbjct 3577 ATC-GTCATCCCAAAGGTCACGATCCGTCAGATCCTTGAGCAAATGCGGATTTACAACCT 3519 Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050 || ||||||| ||||| |||||||| | || | ||| ||||| | ||||| | || | Sbjct 3518 GAAATTCGCCAGATAGTACTCTGCGAGCATAGATATTGGTAGTGTAGGGCTCAATTGACT 3459 Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAAT 137110 ||||||| || ||||| |||||||| | || || ||||| ||| |||| | |||| Sbjct 3458 CGTTGTTGCCTAAAATTTGTGCAGTAGAGGCGGTAGGCATTGGAGCAATCAGGAGGGAAT 3399 Query 137111 TCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCG 137170 | | | ||| | ||| | || || ||| | | | ||||| ||||| ||| | Sbjct 3398 TTCTCACACCATACTGGGCAATTTTTTCCTTTAATTTATCCCAGTCCCACA---TGTCTG 3342 Query 137171 ATTGGGTT--ATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGC 137228 | |||| | |||||||| ||| |||| | || || || |||| || Sbjct 3341 A--GGGTACAACATTCCACATGTCATACTGAAGAATACCTTTGCTCACAGGGGAACCTTG 3284 Query 137229 ATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATA 137288 ||| | ||||| || || | | || || || ||| ||| | | ||||||||| Sbjct 3283 ATAGGTCTCATAAGTGCCCTTGACCTTTGCGAGCTCACAACTTGCTTCCAATGCGCCATA 3224 Query 137289 GTAAATAGTTTCGGAGATTT 137308 ||| || || || | |||| Sbjct 3223 GTATATCGTCTCAAAAATTT 3204 >seq11508 Length=54009 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||||||||| | || || ||| | ||||| |||| ||||| ||| Sbjct 27609 ATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTCG 27550 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || |||||| || |||||||| || || || ||||| Sbjct 27549 GATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCAA 27490 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||| |||| || || ||||| ||||| |||| | | | | || ||| ||||| Sbjct 27489 CAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAAC 27430 Query 25355 ATTCAAAAAGAATCCAC 25371 || || || || ||||| Sbjct 27429 ATCCAGAAGGAGTCCAC 27413 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| | || || ||| | ||||| | || ||||| ||| Sbjct 27153 ATGCAAATCTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTCGAGGCCTCT 27094 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || || || || |||||||| || || || || ||| Sbjct 27093 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAG 27034 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352 || ||||||| | || || ||||| ||||| || | | | | |||| | |||||| Sbjct 27033 CAGCGACTCATCTTCGCTGGTAAACAGCTCGAGGACGGTCGCACGTTGTCTG--ATTACA 26976 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| || || ||||||||| | || || || | | || ||||||| Sbjct 26975 ATATCCAGAAGGAATCCACCCTCCACTTGGTCCTCCGTCTGCGAGGAGG 26927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445027324273920