Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4717 125 6e-24 seq8001 102 6e-17 >seq4717 Length=97001 Score = 125 bits (138), Expect = 6e-24 Identities = 334/507 (66%), Gaps = 14/507 (3%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| || ||||| || | | ||||||| || || | || | |||| Sbjct 93659 CCAAAAATTGTCAACGGTCCCCAAGTGCTGGATAAATACGTCGGAGAGAGCGAGGCAAAT 93600 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | || || |||||||| || || || || ||| | || || || | ||| || Sbjct 93599 ATTCGGCGCTTGTTTGCCGATGCCGAGGATGAAGAGAAGAAGTTGGGACCCAACAGCGGC 93540 Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------CT 19602 | ||||| ||||| | ||||| | ||||| ||||| ||| |||| | Sbjct 93539 CTTCACATAATAATCTTCGATGAGATTGACGCCATCTGCAAGTCTCGAGGAAGCGTGGCG 93480 Query 19603 GGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 || | | ||||| || ||||| |||||||||||||| || | ||| | |||||||| Sbjct 93479 GGAGCTACGGGAGTGCACGACACAGTTGTCAATCAACTGCTCGCGAAAATCGACGGTGTC 93420 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | || ||||||||||| | || ||||| ||||| ||| | ||| | |||||| Sbjct 93419 GAGCAGTTGAATAATATTCTTGTGATTGGAATGACCAATCGGAGGGACATGATAGACGAG 93360 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 || | | || || ||||| |||||| | |||| ||||||| ||||||| || Sbjct 93359 GCTCTGCTGCGTCCTGGTCGATTGGAAGTGCAGATGGAAATTAGTCTACCCGACGAGCAG 93300 Query 19783 GGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGA---CAAAATAACCTTTTA 19839 || ||| | |||||||| || || || || |||||| || || || || | Sbjct 93299 GGCCGTCATCAGATTTTAAATATCCACACGTCGCGAATGCGAGAGCACAAGAAAATTGCA 93240 Query 19840 AATGACGATGTAGATCTAGAAGAAATTGCAGCGGCT-ACCAAAAACTATAGCGGCGCAGA 19898 ||| || ||||| ||| | ||| || | || ||||||| ||| |||||||| Sbjct 93239 TCGGAC---GTGGATCT-GAACGAGTTGGCGCAATTGACGAAAAACTTTAGTGGCGCAGA 93184 Query 19899 ACTTGAGGGATTAGTGAGGGCCGCCCA 19925 | | || || || ||| | || || || Sbjct 93183 ATTGGAAGGTTTGGTGCGTGCTGCACA 93157 >seq8001 Length=75750 Score = 102 bits (112), Expect = 6e-17 Identities = 176/256 (69%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 40699 TGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTTATCA 40758 || |||| || || | || ||||||||| ||| | || || || || ||||| |||| Sbjct 27775 TGTTAACAACCAAGGCAGTGCTTTGGAAAGCCATAGTCGAGGAGCTTTTGTGGTTCATCA 27834 Query 40759 AAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACA 40818 || | || ||||| || ||||| || |||| || || | |||||| |||| ||| Sbjct 27835 GTGGCTCGACAAATGCGAAAAAATTGTCGGAAAAGGGCGTTCGTATTTGGGATGCAAACA 27894 Query 40819 GTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTC 40878 |||| | ||| | || ||||| ||| ||||| || |||||| | || | Sbjct 27895 GTTCGCGTGAGTTCTTGGATGCCAATGGATTGTCAGAAAGGGAGGAGGGTGATTTGGGAC 27954 Query 40879 CTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACTCTGATT 40938 | ||||||||||||||| ||| ||||||||||| || || | |||| | | |||| Sbjct 27955 CAATTTATGGATTTCAGTGGCGTCATTTTGGAGCCAAGTACACAAATATGCATGCAGATT 28014 Query 40939 ATACCAATAAAGGAAT 40954 | || | ||||| || Sbjct 28015 ACACGGAAAAAGGTAT 28030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397397600796280