Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2674 145 9e-30 seq2109 141 1e-28 >seq2674 Length=18091 Score = 145 bits (160), Expect = 9e-30 Identities = 690/1081 (64%), Gaps = 28/1081 (3%) Strand=Plus/Minus Query 117830 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 117889 ||||| ||| | || ||||| || ||||||||||| ||| ||||||||| | |||||| Sbjct 3841 CTTTGTTCGCAAATAATACATTCCAGTCTTGAGCCCGAGCTCCCAGGCATAAAAATGCAT 3782 Query 117890 TGAGGACA--ACTTGGAGAG--GGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATT 117945 ||| | | || | || | || ||| | |||| ||| |||| || || | Sbjct 3781 TGACGTAAGTACATTGACTGTTGGCTGGCCGA--CATGTAGA--TTCAGCGACTGCGACT 3726 Query 117946 GATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCC 118005 |||| | || ||| ||||| || ||||| | | | | ||| | |||||||| Sbjct 3725 GATCAACAAATGCTCCACGATCTGCGGCCATTTTTAAGATTTGCTTTTGCGAGATTTCCC 3666 Query 118006 ACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCA-CGATATTTTGGATGGAT 118064 |||| || | ||||| ||| | || | |||| ||| | |||||||||| || Sbjct 3665 ACACGGTGCGATAGAGTGGCTTCAATTCTGCCGGGA-ATCGTGCAATATTTTGGACCGAG 3607 Query 118065 CCACCC--GCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGA 118122 ||| | | || || || ||||||||| | ||| || || | | | Sbjct 3606 CCATTGTTGGCAAGA--ATTTCATTCTTCATATCGTCATCCCAAAGGTCACGATCCGTCA 3549 Query 118123 GATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA- 118181 |||||| | | |||| ||| ||||| ||| || || | || | | ||| || Sbjct 3548 GATCCTTGAGCAAATGCGGATTTACAACCTGAAATTCGCCAGATAG--TAC-TCTGCGAG 3492 Query 118182 --TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 118239 ||||||||||| ||||| ||||||| |||| ||||| || || ||||| || || | Sbjct 3491 CATAGATATTGGTAGTGTAGGGCTCAATTGACTCGTTGTTGCCTAAAATTTGTGCAGTAG 3432 Query 118240 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 118299 |||| || ||||| || || || || ||| || | | ||| | | ||| || Sbjct 3431 AGGCGGTAGGCATTGGAGCAATCAGGAGGGAATTTCTCACACCATACTGGGCAATTTTTT 3372 Query 118300 CCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGG 118358 |||| | |||||||| | || || | | | | | |||||| ||| |||| Sbjct 3371 CCTTTAATTTATCCCAGTCCCACATGT-CTGAGGGTACAACATTCCACATGTCATACTGA 3313 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || ||||||| | | | || || || | | | |||||||| | ||||| |||| || Sbjct 3312 AGAATACCTTTGCTCACAGGGGAACCTTGATAGGTCTCATAAGTGCCCTTGACCTTTGCG 3253 Query 118419 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478 | || | || || || | || | | || || || |||||||| | || | | Sbjct 3252 AGCTCACAACTTGCTTCCAATGCGCCATAGTATATCGTCTCAAAAATTTGCTTGTTGAGT 3193 Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCT 118538 || |||| |||| ||||| | ||| | | |||| |||| || | ||| Sbjct 3192 TTCTCAGCCTTGTCGCCGTCAAATGGATATCGTAGGAGGAGAAATGCATCAGCCAAACCC 3133 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGA 118598 || || || | ||||||||| || || | ||| || | ||| | | ||| Sbjct 3132 TGAACTCCAATGCCAATTGGTCGGTGGCGACGATTTGAACGCTCAGCCTCGGCAATTGGA 3073 Query 118599 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 118658 || |||| |||||||| | | || |||| | ||||||| || ||||||| | Sbjct 3072 TAGTAATTTACGTCGATAACTCGTTCTAAATTTCTAGTGACAATTTTCGTGATTTGCTTG 3013 Query 118659 AGCTTTTCGTAATCAAAAC---TGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 118715 || ||||| |||||||| | ||| | | | ||||| | | ||| || || Sbjct 3012 AGTTTTTCAAAATCAAAAGATGTACGATT---TGCGCTGACAAAGCGATTAAGAGCAATG 2956 Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || || ||||||||||| | |||||| | || ||| | | | || |||||| Sbjct 2955 GAAGCAAGATTACACACTGCCACTTCATCCGGACTAGAGTATTGCACGACCTCGGTGCAC 2896 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 || || ||||| || ||||||||||| | ||||| ||||| || || || Sbjct 2895 AAATTACTGCTCTTGATTGTGCCCAAGTTTTGCTGATTCGACTTGCGATTGCAGTGGTCT 2836 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACA 118895 ||||| ||||| |||| || || || || || ||||||||||||||| |||||| | Sbjct 2835 TTGTAGAGCATAAATGGTGTTCCAGTTTCAACCTGAGACTTGAGAATAGCCGTCCAGAGA 2776 Query 118896 T 118896 | Sbjct 2775 T 2775 >seq2109 Length=239337 Score = 141 bits (156), Expect = 1e-28 Identities = 461/716 (64%), Gaps = 0/716 (0%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||||||| | ||||| || || || |||| ||||| |||| || || || || ||| Sbjct 130837 TAGATATTGCTTGTGTACGGTTCGAAAGACTCGTTGTTGCCCATAATCTGCGCAGTCGAG 130778 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | ||||| || | | || | | || |||| Sbjct 130777 GCCGTAGGCATAGGAGCGAGCAGAAGTGAATTTCTCACGCCGTGCTGGGCGATTTTTTCC 130718 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 || | ||||||| | || | | | || | | ||||||||| ||||||| Sbjct 130717 TTCAATTTAGCCCAGTCCCACATGTCCGAGGGCACCACGTCCCACATATCGTACTGGAGA 130658 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 ||||||| | | | || || || ||| | |||||||| | ||| | ||| ||| | Sbjct 130657 ATACCTTTGCTCACAGGGGAACCTTCATAAGTCTCATAAGTGCCTTTTTCCTTCGCGAGC 130598 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCC 118481 || | ||| ||||||| || ||| ||||| || |||||||| | || | | | Sbjct 130597 TCACAACTCTCCTCGAGCGCGCCGTAGTACATCGTCTCAAAAATTAGCTTGTTGAGTTTC 130538 Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 118541 | || || ||| ||||| | ||| | | ||| |||| || ||||| || Sbjct 130537 TGAGCTTCTTCGCTCTCAAATGGATATCGCAGGAGGAGAAACGCATCAGCAAGACCCTGA 130478 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAA 118601 | || | ||||| || || || | || || | ||| | | || ||| Sbjct 130477 ATTCCAATACCAATGGGTCGGTGACGACGGTTTGAGCGCTCAGCTTCCGGTAATGGGTAA 130418 Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661 ||| ||||||||| ||| || |||| | ||||||| | |||||| | | ||| Sbjct 130417 CGATTTACATCGATAACTTTATCTAAATTTCTTGTGACAATTCTCGTGATTGCCTTGAGC 130358 Query 118662 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721 ||||| | |||||| | | ||| ||| ||| || || | || || || || Sbjct 130357 TTTTCAAAGTCAAAAGTCTTCGCCTCAGGATTCACAAACATATTTACAGCAATAGAAGCA 130298 Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781 |||||||| || | | ||||| || ||||||| || ||||| |||||||| || Sbjct 130297 AGATTACAAACCGCGACTTCATCTGAATTCGTGTACTGGATGATTTCTGTGCACAAATTG 130238 Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841 || ||| || |||||||||| || || || || ||||| |||||||| Sbjct 130237 CTGCTTGAAATCGTTCCCAAGTTCTGCTGGTTGGATTTACGATTACAATGGTCCTTGTAG 130178 Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATC 118897 |||||||||||||| || || || || |||||||| ||||| |||||| ||| Sbjct 130177 AGCATGTATGGCGTTCCAGTTTCGACCTGAGACTTGAGGATAGCTGTCCAGAGATC 130122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618342001815360