Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2109 187 3e-42 >seq2109 Length=239337 Score = 187 bits (206), Expect = 3e-42 Identities = 613/943 (65%), Gaps = 31/943 (3%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 |||||||| || ||| | ||| | | || ||||||||||| | |||| ||| ||| Sbjct 129750 GGGACAAACGGAGTATCCAACGGTCTGGTGCCCATGCTTCGCGTGTATAACCACACGGCG 129809 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGA 104625 || || || |||| ||||| | | ||| ||| | | ||||| ||||| || Sbjct 129810 CGTTACGTGGATCA----GGGCGGCAACAAGAGACCCGGAGCGTTTGCAGTTTATCTCGA 129865 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 |||||||||||||||| | | || ||| | || ||| ||| || | ||||| Sbjct 129866 GCCATGGCACGCGGATGTATTTGACTTCTTGGATTTGAAGAAAAACACTGGCAAGGAGGA 129925 Query 104686 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | || ||| ||| | || | ||| || |||||||| ||||| || ||||| | || Sbjct 129926 GTACCGTGCCCGTGATTTATTTTACGCCCTGTGGATTCCGGATCTTTTTATGAATCGCGT 129985 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805 | | || | ||| |||||||||||| |||| | || ||||| | ||| | Sbjct 129986 AAAAAACGATGAGATGTGGAGTCTCTTTTGTCCTCACAAATCTCCGGGTCTGTACGAGAC 130045 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTA---CACAAAGTACGAGGAAGAAGGTCGGG-CGA 104861 |||| | | ||||||| | || | || || |||||| || | | || Sbjct 130046 TTGGGGTAAAAAATTTGAAGATATCTATGTCGCA---TATGAGGAAAAAAAACAGTACGT 130102 Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 || | | | ||| ||| | |||| |||||| ||||||||||| ||| |||| Sbjct 130103 TCGCCAAG-TAAAGGCTCGTGATCTCTGGACAGCTATCCTCAAGTCTCAGGTCGAAACTG 130161 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 | || ||||||||||| ||||| ||| ||||| | || || || |||| |||| Sbjct 130162 GAACGCCATACATGCTCTACAAGGACCATTGTAATCGTAAATCCAACCAGCAGAACTTGG 130221 Query 104982 GTGTGA--TCAAG-AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 105038 | || ||||| || |||| | || ||||||||| | | | || | ||||| Sbjct 130222 GAACGATTTCAAGCAG---CAATTTGTGCACAGAAATCATCCAGTACACGAATTCAGATG 130278 Query 105039 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA 105098 | || || ||||| || || || || ||| | | || |||| |||| ||| | | Sbjct 130279 AAGTCGCGGTTTGTAATCTTGCTTCTATTGCTGTAAATATGTTTGTGAATCCTGAGGCGA 130338 Query 105099 AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 |||| ||||| | |||||| ||| | | | | |||| || |||||| | ||| || | | Sbjct 130339 AGACTTTTGACTTTGAAAAGCTCAAGGCAATCACGAGAATTGTCACAAGAAATTTAGATA 130398 Query 105159 GAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGAC 105215 |||||| ||| |||| |||||| | || ||| || || || | | Sbjct 130399 AAGTTATCGATGTAAATCGTTACCCATTACCGGAAGCTGAGCG---CTCAAACCGTCGTC 130455 Query 105216 ACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG 105275 |||| || |||||| | || |||||||||| || |||| || | || || | Sbjct 130456 ACCGACCCATTGGTATTGGAATTCAGGGTCTTGCTGATGCGTTTCTCCTCCTGCGATATC 130515 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 ||||||| ||| ||||| || || |||| || || |||||||| ||||| ||| Sbjct 130516 CATTTGAGAGCGAAGAAGCTCAGAAACTCAACAAGCTAATTTTTGAGACGATGTACTACG 130575 Query 105336 CCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGG 105395 ||| || |||| ||||| ||| | || ||| | || | ||||| || | ||| | Sbjct 130576 GCGCGCTCGAGGAGAGTTGTGAGCTCGCGAAGGAAAAAGGCACTTATGAGACTTATGAAG 130635 Query 105396 GTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGA 105438 |||| || | |||| | || || | ||||||||||| Sbjct 130636 GTTCCCCTGTGAGCAAAGGTATTCTCCAGTACGATATGTGGGA 130678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583172902597440