Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2674 116 4e-21 seq2109 105 7e-18 seq10247 86.0 7e-12 >seq2674 Length=18091 Score = 116 bits (128), Expect = 4e-21 Identities = 337/514 (66%), Gaps = 16/514 (3%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253 |||||||| || ||||||| |||| || ||| | | | || | |||||||||||| Sbjct 2126 ATGCGCGTGGCAGTGGGTATACACGAGGAGGACATTGATTC-TGCCATTGAGACGTACGA 2184 Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 | || |||| || ||||| || ||| ||||||| || || ||| | || Sbjct 2185 GTATTTGTCGGAAAAATATTTTACACATGCCTCGCCAACGCTTTTTGCCGCGTGCACACC 2244 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 || | || ||||| |||||||| || || | |||| || ||| || |||||||| Sbjct 2245 TCGTCAACAAATGTCTAGCTGCTTTCTCCTGACCATGACCGACGACAGCATGGACGGCAT 2304 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG------ 53427 ||||| || || ||| ||||| | || |||| | |||||||| || Sbjct 2305 TTACGATACACTAAAGCGCTGTGCTCTAATTAGCAAGACTGCCGGTGGTATTGGCCTTAG 2364 Query 53428 TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 | | ||||| | || || || ||| | | ||| || || ||| | | Sbjct 2365 TGTGCACTGTA------TTCGCGCAAAAGGCTCGCAAATTCGTGGCACATCTGGCCTGTC 2418 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | |||| | || || ||||| || || |||||||| || || || ||||| | ||||| Sbjct 2419 CAATGGCCTAGTTCCCATGCTGCGTGTATTCAACAATACTGCACGCTACGTGGATCAGGG 2478 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || ||||| || | || |||||||| |||||||||||||| || || ||| | Sbjct 2479 AGGCAACAAGCGACCCGGTGCCTTTGCCATCTATCTCGAGCCGTGGCATGCTGATATTTT 2538 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGT 53666 |||||| | || |||| ||| || | |||||| ||| ||| || ||||| | Sbjct 2539 CGAGTTTTTAGATTTGCGAAAAAATACAGGCAAGGAAGAGTCGCG-TGCGCGAGACCTAT 2597 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCA 53700 || ||||| ||||| || || | || ||||| Sbjct 2598 TTTACGCTCTCTGGATCCCCGATTTGTTTATGCA 2631 >seq2109 Length=239337 Score = 105 bits (116), Expect = 7e-18 Identities = 191/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||| || ||| | ||||||| || ||| ||||| ||||||||||| || |||||| Sbjct 129609 AGCTGTTTTCTGCTTGCGATGACCGAGGACAGCATCGAGGGCATCTACGACACCCTCAAG 129668 Query 53390 GAGTGTGCCCACATCTCCAAGT--GGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTC 53446 |||||| ||| ||| | ||| |||||||| || | ||| | | | | || Sbjct 129669 CGTTGTGCCTTGATCAGCAAATCCGGT--GGTGGTATAGGCCTGCACATTCAC-TGCATC 129725 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 ||||| || || || ||||| ||||| ||||| || || | || | ||||| ||| Sbjct 129726 CGTGCCAAAATGACGCCCATCAACGGGACAAACGGAGTATCCAACGGTCTGGTGCCCATG 129785 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGG 53566 || ||||| | ||| ||||||| || ||||| | ||||| || ||| | || Sbjct 129786 CTTCGCGTGTATAACCACACGGCGCGTTACGTGGATCAGGGCGGCAACAAGAGACCCGGA 129845 Query 53567 TCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 |||| || | || |||||||| |||||||| || Sbjct 129846 GCGTTTGCAGTTTATCTCGAGCCATGGCACGCGGA 129880 Score = 89.7 bits (98), Expect = 6e-13 Identities = 284/430 (66%), Gaps = 14/430 (3%) Strand=Plus/Plus Query 55493 CTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCG 55552 ||||||| | || ||||| || || ||||| || ||||| ||||||||||||||| | Sbjct 130755 CTGCTCG---CTCCTATGCCTACGGCCTCGACTGCGCAGATTATGGGCAACAACGAGTCT 130811 Query 55553 TTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATG 55612 ||||| |||||||| | ||| |||||| |||| || || |||| || || || Sbjct 130812 TTCGAACCGTACACAAGCAATATCTACGTGCGTCGAGTACTCTCAGGCGAATTCCAAATC 130871 Query 55613 ATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAG 55672 || ||| || ||| | | || | ||| || || ||| || | || | | Sbjct 130872 ATTAACCCTCATCTCTTGAGAGATTTAATCAAGCTCGACCTCTGGGACGATGATATGAGG 130931 Query 55673 ACGGATATTG--TGCGGAACGGGGGGTCCGTCCAG--AATC--TGGAGATTCCTCTGCG- 55725 | || |||| ||| || || || || ||| |||| ||| ||||| | || Sbjct 130932 AATGA-ATTGATTGC-TAAAAATGGTTCAGTGCAGGAAATCAACGGA-ATTCC-CGACGA 130987 Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||| ||| | ||| || || ||||| ||| | || || | | | | | ||| Sbjct 130988 AATCAAAGAGTTGTACAAAACTGTTTGGGAAATTTCGCAAAAAACTATTCTAAAAATGGC 131047 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||||| || | || |||||||| ||||| ||||| | ||||| | || Sbjct 131048 AGCTGATCGTGGAGCCTTTATTGACCAGTCTCAGTCGCTGAATGTTCACATGGCACAACC 131107 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || | |||||||| |||||||| ||||||| ||| | || || || || || Sbjct 131108 TACAACGAGCAAGTTGACATCGATGCATTTTTACGCATGGGATCTTGGTCTTAAAACCGG 131167 Query 55906 TATGTACTAT 55915 ||||| ||| Sbjct 131168 CATGTATTAT 131177 >seq10247 Length=210703 Score = 86.0 bits (94), Expect = 7e-12 Identities = 285/441 (65%), Gaps = 2/441 (0%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| || || || || || ||||| || |||| |||||| | || || |||| || Sbjct 193790 CCGGTGCCAATTCCGTCGGCGCCGTTCACGAGAACCATCGGGATTATCGGCACGTAGAAT 193731 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTC-AGCCGG 151994 |||||||||| | | | || || | |||| | | | | ||| || | Sbjct 193730 ACCGGCTCCACGCGCTTGTCATCCTCGAATTCGTAGCGGTACAGTGGCTCGTCGAGTTTG 193671 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 | ||| || | ||||||| || |||| ||| |||||||||| | ||| ||||| Sbjct 193670 TT-GAAGATGTGCCGAGTCAGCGGGCTCATGATTGTGTAGATGTATCGAGGGCTTGCCGC 193612 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 || || || || || ||||| || ||||| || ||| || ||||| || || Sbjct 193611 GTCTTTCCCGCCCTGAAGTCGCGTACCGAACTGACCGTTTGGCAGCAGTAGGTTTAGATT 193552 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| | ||| ||||||||||| || ||||| | || || |||||| | || || Sbjct 193551 GTTTGAGCCGACGAAATTCTGCGCTAAATTTATGATTGTCGACTGCAGCGAGACCTCGCC 193492 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGT 152234 ||| || || ||| | || | | ||||| ||| || || || || | || | Sbjct 193491 GTGATGGTAGCCCGACATTTCGCTCACGGCTCCCGACAATTGAGCGACTTTGACTTCTTT 193432 Query 152235 CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294 | | ||| ||||||||| | | | || ||||| | |||| || || || ||||| Sbjct 193431 CCTGTCGTTGCGCTTGAGACAAGAGAAGATTACCTTCCTCTGGCCCGGCTTGAAGCCGTC 193372 Query 152295 CACCACGTGAGGAATCGAACG 152315 | || || ||||| || || Sbjct 193371 AATCATGTTGGGAATTGATCG 193351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547133534548800