Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1005 132 3e-26 seq11508 123 2e-23 >seq1005 Length=228466 Score = 132 bits (146), Expect = 3e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| |||||||| || || |||||| |||||||| || || || || || || Sbjct 172186 AGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 172127 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||||||||| ||||| || || ||||| ||||| || || | ||||||| Sbjct 172126 CCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCC 172067 Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | ||| ||||| | ||| || || | || Sbjct 172066 TTGTCCTGGAT-TTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGT 172008 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || |||||||| || | ||||| ||||| ||||||||| Sbjct 172007 AATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCATG 171968 Score = 122 bits (134), Expect = 5e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 || ||||| | ||| || | |||||||| || || |||||| |||||||| || || Sbjct 172426 TCACCGCCACGAAGTCGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCA 172367 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 || || || || | ||||| ||||||||||| ||||| || || ||||| ||||| || Sbjct 172366 GACAGAGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGG 172307 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTC 34655 || | ||||||||||| |||| || | || ||| | || |||| | ||| Sbjct 172306 GGAATGCCCTCCTTGTCCTGGATC-TTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTC 172248 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| ||| || || || || || || ||||| |||||||| ||||| Sbjct 172247 AACTTCCAAGGTAATGGTCTTGCCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Score = 120 bits (132), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| || ||||| || || |||||| |||||||| || || || || || || Sbjct 171730 AGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGG 171671 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || |||||||| ||||| || || ||||| ||||| || || | ||||||| Sbjct 171670 CCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCC 171611 Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | ||| ||||| | ||| || || | || Sbjct 171610 TTGTCCTGGAT-TTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGT 171552 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || |||||||| || | ||||| ||||| ||||||||| Sbjct 171551 GATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCATG 171512 Score = 114 bits (126), Expect = 8e-21 Identities = 162/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | |||||| || |||||| || ||||| || || || || || ||| Sbjct 171502 AGACGCAGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGC 171443 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || || ||||| ||||| || || | |||||| Sbjct 171442 CCATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATGCCCTCC 171383 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | ||| |||| ||| ||||||| ||| Sbjct 171382 TTGTC-CTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGT 171324 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 || || ||||| |||| ||||| ||||| |||||||||||||| Sbjct 171323 AATGGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTTGAT 171279 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | |||||| || |||||| || ||||| || || || || || ||| Sbjct 171958 AGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGC 171899 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || || || || || || ||||||||||| || || | ||||||| Sbjct 171898 CCGTCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCC 171839 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||| | || ||| | ||| |||| ||| ||||||| || Sbjct 171838 TTGTC-CTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGT 171780 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| || || | || || || ||||| |||||| Sbjct 171779 GATGGTTTTTCCAGTGAGGGTCTTGACGAAAATTTGCATG 171740 >seq11508 Length=54009 Score = 123 bits (136), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||||| |||||||| || ||| |||||| |||||||| || || || Sbjct 27839 CCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 27898 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || |||||||| || | |||||||| ||||| || Sbjct 27899 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGG 27958 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTT-CGCTCTCCA 34657 | || |||||||| ||||||| | || ||| | ||| ||||| ||| ||| | Sbjct 27959 ATGCCTTCCTTGTCCTGGATCTTT-GCCTTGACGTTCTCAATCGTGTCCGACGC-CTCGA 28016 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || ||||| | |||||||| ||||||||||| Sbjct 28017 CCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCAT 28065 Score = 91.5 bits (100), Expect = 9e-14 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| | ||| | |||| |||||| || ||| ||||| ||||| || || || Sbjct 27155 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27214 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| |||| || || || || ||||| || || | ||||| ||||| || || Sbjct 27215 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27274 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| |||||| |||| || | || ||||| | ||| || Sbjct 27275 ATGCCCTCTTTGTCCTGGATCTTCGCCTTTA-CGTTCTCGATCGTGTCAGAGGCCTCAAC 27333 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || |||||||| || | ||||| || |||||||||||| Sbjct 27334 CTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCATG 27382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314683355993048