Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1868 170 2e-37 seq11508 163 2e-35 seq1005 156 4e-33 >seq1868 Length=114019 Score = 170 bits (188), Expect = 2e-37 Identities = 209/283 (74%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 135476 TGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATG 135535 ||||||||||| || ||||| ||||||||||||||||||||| || ||||||||| Sbjct 69695 TGGAACGCGGCGCAGAACCAGCTGGTGCGAGAAGGCAAAATGCACGGTTTCATGCGCATG 69636 Query 135536 TATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTA-CAACACGC 135594 |||||||| ||||| || | || ||||| | | || | ||||| | |||| || Sbjct 69635 TATTGGGCGAAAAAAATTCTCGAGTGGTCAAAAACTCCCGAGGAGGCCTTGGCAACG-GC 69577 Query 135595 AATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTTG 135654 ||| | | || || | |||||| | ||||| | ||| ||||||| |||||||| || Sbjct 69576 AATTTACCTCAACGACAAGTACAGTATGGATGGCAGGGATCCAAATGGATACGTAGGCTG 69517 Query 135655 TATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCAA 135714 |||||||| ||||| || | ||||| || ||||||||||| | | |||||||| Sbjct 69516 CATGTGGTCAATTTGTGGCATCCACGACATGGGCTGGAAGGAGCGAGAGATTTTTGGCAA 69457 Query 135715 GATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAAT 135757 |||||| || ||||| || | || ||| | |||||||| || Sbjct 69456 GATTCGATACATGAATTACGCGGGATGTGCGCGAAAATTTGAT 69414 >seq11508 Length=54009 Score = 163 bits (180), Expect = 2e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || |||||||| || || |||||||| ||||| ||| | || || ||||| || || || Sbjct 28068 GCAATGCAGATTTTCGTGAAAACTCTCACCGGGAAGACCATCACCCTTGAGGTCGAGGCG 28009 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| ||||||||| ||||| ||| || || ||||| |||||||| ||||| ||| Sbjct 28008 TCGGACACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGAT 27949 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 |||||||| | || | ||||| || || | || ||| | || | ||||| ||| Sbjct 27948 CAACAGCGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTAC 27889 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| |||||||| ||| | ||||||||| ||||| | || ||||| || Sbjct 27888 AACATTCAGAAGGAGTCCACCCTTCATTTGGTTCTGCGTCTCCGAGGTGGAAT 27836 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| || || || || | || || || || || || | || Sbjct 27609 ATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTCG 27550 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | ||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct 27549 GATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCAA 27490 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| |||| | ||| || ||||| | || || || || | ||||| |||||| Sbjct 27489 CAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAAC 27430 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | ||| | ||| |||| || ||||| Sbjct 27429 ATCCAGAAGGAGTCCACTCTCCATCTCGTTCTCCGTCTGCGTGGAGGCAT 27380 >seq1005 Length=228466 Score = 156 bits (172), Expect = 4e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||||||||| || || | |||||||| || || || | || Sbjct 171968 CATGCAGATCTTTGTCAAAACTCTGACTGGTAAAACAATTACTCTCGAGGTCGAGGCCTC 172027 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| ||||| || ||||| || || || ||||| || || Sbjct 172028 CGACACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATCCCACCAGACCA 172087 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | || || |||||| | ||||| | ||| | || || ||||| Sbjct 172088 GCAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACCCTGTCTGACTACAA 172147 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||||||| | |||||||| |||||| |||| || || || Sbjct 172148 CATTCAGAAGGAGTCGACCCTGCATTTGGTCTTGCGTCTGCGTGGAGGAAT 172198 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||||||||| || || | || ||||| || || || | || Sbjct 171512 CATGCAGATCTTTGTCAAAACTCTGACTGGTAAAACAATCACTCTCGAGGTCGAGGCCTC 171571 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| ||||| || ||||| || || || || || || || Sbjct 171572 CGACACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATTCCTCCAGACCA 171631 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | || || ||||| |||| || | ||| | || || ||||| Sbjct 171632 GCAGCGATTGATCTTTGCGGGTAAACAGCTGGAGGATGGCCGCACCCTGTCTGACTACAA 171691 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||||||| | ||||| || |||||| |||| || ||||| Sbjct 171692 CATTCAGAAGGAGTCGACCCTGCATTTAGTCTTGCGTCTGCGTGGAGGCAT 171742 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || || || ||| | ||||| | ||||| || | || Sbjct 171284 CATGCAGATCTTTGTTAAAACACTAACTGGTAAGACCATTACCTTGGAAGTTGAGGCTTC 171343 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| ||||||| ||||| |||||||| ||||| || ||||| || || || || Sbjct 171344 CGACAGCATTGAGAACGTCAAGGCTAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCA 171403 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| || || | |||||| || || | || || | ||| | ||||| ||||| Sbjct 171404 GCAGCGATTGATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACAA 171463 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | ||| | || ||||| |||| || ||||| Sbjct 171464 CATCCAGAAGGAGTCGACACTCCATCTCGTCCTGCGTCTGCGTGGAGGCAT 171514 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| |||||| | ||||| | ||||| || | || Sbjct 172197 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCTTGGAAGTTGAGGCCTCT 172256 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| || |||| ||||| || || || ||||| || ||||| || || || || Sbjct 172257 GACAGCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 172316 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || || |||||| | ||||| | || | || || |||||| Sbjct 172317 CAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACTCTGTCTGACTACAAC 172376 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| |||||||||||| | |||||||| Sbjct 172377 ATTCAGAAGGAGTCGACCCTTCATTTGGT 172405 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || || || || || || || | || || | ||||| || | || Sbjct 171740 CATGCAAATTTTCGTCAAGACCCTCACTGGAAAAACCATCACGTTGGAAGTTGAGGCTTC 171799 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| ||||||| ||||| |||||||| ||||| || || || || || || || Sbjct 171800 CGACAGCATTGAGAACGTCAAGGCTAAAATTCAGGACAAGGAGGGAATTCCCCCAGACCA 171859 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| || || | ||| || || || | || ||| | ||| | ||||| ||||| Sbjct 171860 ACAGCGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGGCGCACCCTGTCCGACTACAA 171919 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | ||| | || | ||| |||| || ||||| Sbjct 171920 CATCCAGAAGGAGTCGACGCTCCATCTCGTCCTTCGTCTGCGTGGAGGCAT 171970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434852857797120