Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq11508 123 2e-23 seq1005 116 3e-21 >seq11508 Length=54009 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || |||||||||||||| ||||| ||||| ||||| || || || | Sbjct 27610 AATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTC 27551 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| || | |||| | || |||||| |||||||| || | || || ||||| Sbjct 27550 GGATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCA 27491 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| |||| || || || ||||| || || || | |||||| | ||| ||||| Sbjct 27490 ACAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAA 27431 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | ||| | ||| | | |||| ||||| Sbjct 27430 CATCCAGAAGGAGTCCACTCTCCATCTCGTTCTCCGTCTGCGTGGAGG 27383 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| ||||| ||||| || || || ||||| || || || || | | Sbjct 28066 AATGCAGATTTTCGTGAAAACTCTCACCGGGAAGACCATCACCCTTGAGGTCGAGGCGTC 28007 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || ||| || ||||| ||||| | || || ||||| Sbjct 28006 GGACACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGATCA 27947 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || |||||||| || || || || |||| |||||| | ||| ||||| Sbjct 27946 ACAGCGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTACAA 27887 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || |||||||| | ||||| ||| | | | ||||| ||| Sbjct 27886 CATTCAGAAGGAGTCCACCCTTCATTTGGTTCTGCGTCTCCGAGGTGGA 27838 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||||||||||| ||||| ||||| || || ||||| || | Sbjct 27381 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCT 27322 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | |||| || || |||||||| || | || ||||| || Sbjct 27321 GACACGATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAG 27262 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| || || || || |||| | || | || |||||| Sbjct 27261 CAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAAC 27202 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||||||||| || | ||| | || | | |||||||| ||| Sbjct 27201 ATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGA 27154 Score = 105 bits (116), Expect = 5e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || |||||||||||||| || || |||||||| |||||||| | | Sbjct 27838 AATGCAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTC 27779 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | ||| | || || ||||| ||||| | || ||||| | Sbjct 27778 CGACACAATCGAGAATGTCAAAGC-TAAGATCCAGGACAAGGAAGGCATCCCACCAGACC 27720 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| | || || ||||| || || || || |||| | || | || |||| Sbjct 27719 AGCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACA 27660 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| ||||||||||| || | ||| | || | | |||||||| ||| Sbjct 27659 ACATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGA 27610 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| |||||||||||||| ||||| ||||| || || || || || | Sbjct 27154 AATGCAAATCTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTCGAGGCCTC 27095 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || |||||||| || | || ||||| || Sbjct 27094 TGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCA 27035 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || || ||||| || || |||| ||||| || |||||||| Sbjct 27034 GCAGCGACTCATCTTCGCTGGTAAACAGCTCGAGGACGGTCGCACGTTGTCTGATTACAA 26975 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| | || || || | | |||||||||| Sbjct 26974 TATCCAGAAGGAATCCACCCTCCACTTGGTCCTCCGTCTGCGAGGAGG 26927 >seq1005 Length=228466 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||| || || || ||||| ||||||||||| || || || | Sbjct 171513 ATGCAGATCTTTGTCAAAACTCTGACTGGTAAAACAATCACTCTCGAGGTCGAGGCCTCC 171572 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || ||||| ||||| || || | || ||||| || Sbjct 171573 GACACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATTCCTCCAGACCAG 171632 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || ||||| || ||||| ||||| || | ||||| | || |||||| Sbjct 171633 CAGCGATTGATCTTTGCGGGTAAACAGCTGGAGGATGGCCGCACCCTGTCTGACTACAAC 171692 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | |||||||| || | |||| ||||| Sbjct 171693 ATTCAGAAGGAGTCGACCCTGCATTTAGTCTTGCGTCTGCGTGGAGG 171739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337959935404448