Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq11508 145 2e-29 seq2569 129 1e-24 seq9511 111 4e-19 seq5183 107 5e-18 seq4210 96.9 8e-15 >seq11508 Length=54009 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| |||||||| || |||| ||||||||| | ||| || | || || Sbjct 26942 AGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGACAACGTGCGACCGTCC 27001 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| ||||| || ||||| || || || || || ||||| Sbjct 27002 TCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCC 27061 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| |||| || || || | ||||| || Sbjct 27062 TGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACCTCAAGGGTGATGGTT 27121 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| | ||||| | ||| | ||||||| Sbjct 27122 TTACCCGTGAGGGTTTTGACGAAGATTTGCATT 27154 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| || || |||||||||| ||||| || | || ||||| || || Sbjct 27626 AGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCC 27685 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || ||||| || ||||| || || || ||||||||||| Sbjct 27686 TCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCC 27745 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| ||||| ||||| || | || || || | ||||| ||| Sbjct 27746 TGGATCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTC 27805 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||| | ||||| | || | |||||| Sbjct 27806 TTGCCCGTGAGGGTTTTGACAAAGATCTGCATT 27838 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||||||||| || || |||| ||||| |||| | ||| | ||||| Sbjct 27398 AGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCC 27457 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || |||||||| || ||||| ||||| || || || || || || |||||| Sbjct 27458 TCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCT 27517 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| |||||| || || |||| || || || | ||||| || Sbjct 27518 TGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTT 27577 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| | ||||||| || | ||||||| Sbjct 27578 TTACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || | || || ||||| || || || | ||||| |||| | ||| Sbjct 27845 CGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 27904 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| ||||| ||||| || || || || ||| Sbjct 27905 CGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCCT 27964 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| ||||||||| ||| || || || ||||| || | || || || | Sbjct 27965 TCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAGG 28024 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| || || | |||||| | ||| | |||||| Sbjct 28025 GTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 >seq2569 Length=108685 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| |||| ||||| |||| ||| || | ||||| || ||||| || |||||||| | Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAA 43133 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | ||| || || || || ||||| || || ||||| |||||||| ||| ||| || Sbjct 43134 TCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTT 43193 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 ||||||||||||| | || || || | ||||| ||||| ||||| | |||||| | | Sbjct 43194 CGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACAA 43253 Query 225704 ACACTTGCATT 225714 | | ||||||| Sbjct 43254 AGATTTGCATT 43264 >seq9511 Length=4692 Score = 111 bits (122), Expect = 4e-19 Identities = 108/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || |||| ||||||| |||| ||||| || ||||||||||||| |||||||||| Sbjct 1161 ATGTCAAGGGCTGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCT 1102 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | | |||||| || ||||||||||||| |||||| |||| | | |||| ||| Sbjct 1101 TGTGCGGGCCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGA 1042 Query 7845 ATATTT-ACGCGTTAGCT 7861 || ||| | ||||||||| Sbjct 1041 ATGTTTAATGCGTTAGCT 1024 Score = 104 bits (114), Expect = 6e-17 Identities = 93/113 (82%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| ||||||||||||||||||||||| | ||||||||| || ||| | ||||| Sbjct 486 TGAGAGGATGATCAGCCACATTGGGACTGAGACACGGCCCAAA-CTCCTACGGGAGGCAG 544 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 |||||| ||||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 545 CAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 597 Score = 86.0 bits (94), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683 |||| ||||| || |||||||||||||||| ||||||||||| ||| || |||| | Sbjct 4339 GGTGGCACAGACCAGGGGGTAGCGACTGTTTATCAAAAACACAGGGCTCTGCGAAGTCGC 4398 Query 372684 AAAACGATGTATAGGGTCTGAC 372705 || |||| |||||||||||||| Sbjct 4399 AAGACGACGTATAGGGTCTGAC 4420 >seq5183 Length=17349 Score = 107 bits (118), Expect = 5e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||||||||||||||| || |||||||||||||| | || ||||| || || |||| Sbjct 2267 TTCAGGATGACCAAAAAACCAAAATAAATGTTGATATAAAATTGGATCCCCCCCACCTGC 2208 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| |||||| ||||||| ||||||||| Sbjct 2207 AGGATCAAAAAAAGAAGTATTTAAATTTCGATCAGTTAA 2169 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||||||||||||||| || |||||||||||||| | || ||||| || || |||| Sbjct 2370 TTCAGGATGACCAAAAAACCAAAATAAATGTTGATATAAAATTGGATCCCCCCCACCTGC 2311 Query 370732 TGGATCAAAAAAGCTAGTATTAAAAT 370757 ||||||||||| |||||| |||| Sbjct 2310 AGGATCAAAAAAAGAAGTATTTAAAT 2285 >seq4210 Length=159020 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||||||| ||||| || || || ||||| || |||| |||||| |||| ||| || Sbjct 117222 ACGAAGTCTCAGTACAAGATGCAGCGTCGATTCCTTCTGGATATTGTAGTCGGACAATGT 117163 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| |||||||| || || || || || | || || || || ||||| || Sbjct 117162 TCGACCATCTTCCAGCTGCTTACCGGCAAAAATCAGCCTCTGCTGATCTGGGGGAATTCC 117103 Query 225612 T 225612 | Sbjct 117102 T 117102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192346992686864