Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq11508 150 4e-31 seq1005 120 7e-22 seq2569 93.3 1e-13 >seq11508 Length=54009 Score = 150 bits (166), Expect = 4e-31 Identities = 164/216 (76%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || |||||||||||||||||||| || | | ||||| || || Sbjct 27625 GAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTC 27684 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| |||||||| || || | ||||||||| | | ||| |||||||| Sbjct 27685 CTCGAGCTGCTTT--CCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTG 27742 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || ||||||| |||| | |||| ||| ||| ||||| ||||| || Sbjct 27743 TCCTGGATCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATG 27802 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||||||||| || || || |||| ||||||| Sbjct 27803 GTCTTGCCCGTGAGGGTTTTGACAAAGATCTGCATT 27838 Score = 116 bits (128), Expect = 9e-21 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || |||||||||||||||||||| || | | ||||| || || Sbjct 27169 GAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTC 27228 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| |||||||| || || | ||||||||| | | ||| || || || Sbjct 27229 CTCGAGCTGCTTT--CCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTG 27286 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || || || |||| | |||| || ||| || ||||| || || Sbjct 27287 TCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATG 27346 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || || ||||| | |||||| Sbjct 27347 GTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 Score = 111 bits (122), Expect = 4e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| ||||| ||||| || ||||||||||| |||| | ||| | ||||| Sbjct 27397 GAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATC 27456 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| || ||||| || || | ||| || |||| | ||| || || || || Sbjct 27457 CTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTC 27516 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| |||||| | || | | || || ||| || || || || || || Sbjct 27517 TTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGT 27576 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| |||||||| || || || |||| |||||| Sbjct 27577 TTTACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 >seq1005 Length=228466 Score = 120 bits (132), Expect = 7e-22 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 171496 AGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCC 171437 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| |||||||| || | | ||||||||| | | || || ||||| | Sbjct 171436 TCGAGCTGCTTT--CCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGT 171379 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | |||||||| ||||| |||| | |||||| ||| ||| ||||| | ||||| | Sbjct 171378 CCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAATGG 171319 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || || || || || || |||| |||||| || Sbjct 171318 TCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTT 171282 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || ||||| || ||||||||||| |||| | || | ||| || Sbjct 171952 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCC 171893 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || ||||| || | | ||| ||||| | | ||||| ||||| | Sbjct 171892 TCGAGCTGCTTT--CCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCCTTGT 171835 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | |||||||| ||||| |||| | |||||| ||| ||| ||||| | || || | Sbjct 171834 CCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGTGATGG 171775 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||| ||||| | ||||| Sbjct 171774 TTTTTCCAGTGAGGGTCTTGACGAAAATTTGCAT 171741 >seq2569 Length=108685 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| ||||||||||| |||| || || | ||||| || || ||| || ||||| | Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAA 43133 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | |||||| || | | ||||| || || || || || || |||||| | | Sbjct 43134 TCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTT 43193 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||||||| ||| || || || || || || || ||||| ||||| ||||| | Sbjct 43194 CGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACAA 43253 Query 152095 AGACCTGCATT 152105 ||| |||||| Sbjct 43254 AGATTTGCATT 43264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153642572185576