Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq11508 178 3e-39 seq2569 152 1e-31 seq1005 138 3e-27 seq4210 87.8 4e-12 >seq11508 Length=54009 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| ||||| || ||||| |||||||| ||||| || ||| ||| Sbjct 27378 CAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCTGAC 27319 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||| ||||||||||| || ||||| || |||||||| Sbjct 27318 ACGATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAGCAG 27259 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || ||||||||||| |||||||| || || || || || | || || ||| || Sbjct 27258 CGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAACATC 27199 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || || ||||| || Sbjct 27198 CAAAAAGAGTCGACCCTCCATCTGGT 27173 Score = 170 bits (188), Expect = 5e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||||||||| || || || |||||||| ||||| || || ||| Sbjct 28062 CAGATTTTCGTGAAAACTCTCACCGGGAAGACCATCACCCTTGAGGTCGAGGCGTCGGAC 28003 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||||||||| |||||| |||||||| ||||| ||||| ||||| || || Sbjct 28002 ACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCGGATCAACAG 27943 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| |||||||| |||||||| || || | ||||| |||| || ||| | Sbjct 27942 CGACTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTCTCCGACTACAACATT 27883 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || || ||| | ||| || | ||| || Sbjct 27882 CAGAAGGAGTCCACCCTTCATTTGGTTCTGCGTCTCCGA 27844 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| ||||| || ||||| |||||||| ||||| || ||| ||| Sbjct 27150 CAAATCTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTCGAGGCCTCTGAC 27091 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| || ||||| ||||||||||| || ||||| || |||||||| Sbjct 27090 ACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAGCAG 27031 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| |||||||| || ||||||||||| || || | || | | ||||| || || Sbjct 27030 CGACTCATCTTCGCTGGTAAACAGCTCGAGGACGGTCGCACGTTGTCTGATTACAATATC 26971 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 26970 CAGAAGGAATCCACCCTCCA-CTTG 26947 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| ||||| || ||||| |||||||||||||| || ||| || Sbjct 27606 CAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTCGGAT 27547 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct 27546 ACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCAACAG 27487 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || ||||| || ||||||||||| ||||| | ||||| |||| || ||| || Sbjct 27486 CGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAACATC 27427 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||| ||| Sbjct 27426 CAGAAGGAGTCCACTCTCCATCTCGTT 27400 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| || || || ||||| || || || || || ||| Sbjct 27834 CAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTCCGAC 27775 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| |||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct 27774 ACAATCGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCAGCAG 27715 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || ||||||||||| |||||||| || || || || || | || || ||| || Sbjct 27714 CGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAACATC 27655 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 |||||||| || || || ||||| || Sbjct 27654 CAAAAAGAGTCGACCCTCCATCTGGT 27629 >seq2569 Length=108685 Score = 152 bits (168), Expect = 1e-31 Identities = 146/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||||| || || || || |||||||||||||| || |||||| Sbjct 43260 CAAATCTTTGTGAAAACTCTAACGGGTAAGACCATCACCCTCGAGGTCGAGGCTTCAGAC 43201 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| ||||||||||| ||||| || || || ||||| Sbjct 43200 ACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGATCAGCAG 43141 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| ||||||||||| || |||||| | || | |||| || ||| || Sbjct 43140 CGATTGATTTTCGCTGGAAAACAGCTGGAGGATGGACGCACATTGTCCGACTACAACATC 43081 Query 178104 CAAAAAG 178110 || |||| Sbjct 43080 CAGAAAG 43074 >seq1005 Length=228466 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| |||||||| ||||| | || || || || ||| Sbjct 171744 CAAATTTTCGTCAAGACCCTCACTGGAAAAACCATCACGTTGGAAGTTGAGGCTTCCGAC 171803 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| ||||||||||| || ||||||||||| || ||||| || || ||||| || Sbjct 171804 AGCATTGAGAACGTCAAGGCTAAAATTCAGGACAAGGAGGGAATTCCCCCAGACCAACAG 171863 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| ||||| |||||||| || || | || || |||| || ||| || Sbjct 171864 CGATTGATTTTCGCTGGAAAGCAGCTCGAGGACGGGCGCACCCTGTCCGACTACAACATC 171923 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 171924 CAGAAGGAGTCGACGCTCCATCTCGT 171949 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||||| || || ||||| || || |||||||| || ||| ||| Sbjct 171972 CAGATCTTTGTCAAAACTCTGACTGGTAAAACAATTACTCTCGAGGTCGAGGCCTCCGAC 172031 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| || || |||||||| || |||||||| || |||||||| Sbjct 172032 ACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAG 172091 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || ||||| ||||||||||| | || || | || || ||| | Sbjct 172092 CGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACCCTGTCTGACTACAACATT 172151 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || |||||| | || ||| Sbjct 172152 CAGAAGGAGTCGACCCTGCATTTGGTCTTG 172181 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || || || || ||| | || || || || ||| Sbjct 171288 CAGATCTTTGTTAAAACACTAACTGGTAAGACCATTACCTTGGAAGTTGAGGCTTCCGAC 171347 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| ||||||||||| || ||||||||||| || || || || || |||||||| Sbjct 171348 AGCATTGAGAACGTCAAGGCTAAAATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 171407 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||||||||| |||||||| ||||| | || || |||| || ||| || Sbjct 171408 CGATTGATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACAACATC 171467 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| ||||| || Sbjct 171468 CAGAAGGAGTCGACACTCCATCTCGT 171493 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || ||||| | || || || || || ||| | || || || ||| ||| Sbjct 172200 CAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCTTGGAAGTTGAGGCCTCTGAC 172259 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||||||||||||| ||||| |||||||| || || || || || |||||||| Sbjct 172260 AGCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 172319 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || ||||| ||||||||||| | ||||| | || || ||| | Sbjct 172320 CGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACTCTGTCTGACTACAACATT 172379 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 172380 CAGAAGGAGTCGACCCTTCAT 172400 >seq4210 Length=159020 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||||| || || || || |||||||| ||||| || || ||| Sbjct 116941 CAAATTTTCGTTAAAACTCTTACGGGGAAGACCATCACCCTTGAGGTCGAGGCTTCTGAC 117000 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 || || || || |||||| ||||| |||||||||||||| Sbjct 117001 ACGATTGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGG 117041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203545262650864