Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2172 230 2e-55 seq84480 190 2e-43 seq4167 105 6e-18 seq1544 87.8 2e-12 seq4140 82.4 7e-11 >seq2172 Length=16819 Score = 230 bits (254), Expect = 2e-55 Identities = 588/883 (67%), Gaps = 19/883 (2%) Strand=Plus/Minus Query 105611 TTACGCCGGTCCAGCCGCGGCCGTACATGGCGACGCCCACAATTATTTTGTTGGGATCGA 105670 |||| || |||||||| | || |||||||| || || || | || || |||| || Sbjct 8147 TTACTCCAGTCCAGCCTCTTCCATACATGGCAACACCAACGACGATCTTCTTGGAGCTGA 8088 Query 105671 CGCCTTGTTTCAGTAACGCATCGACAGCGTAGTGTGTAGTGTATAGCTCT-TCCGAGTTC 105729 | ||||| || | | | |||| || ||| || |||||| ||| | || |||| Sbjct 8087 CTCCTTGAGCCAAGAGAGATTTGACACCGAAGTCAGTTGTGTATGTCTCGCTGCG-GTTC 8029 Query 105730 CAACTTGGCGCGT--AGACTGTTGTTTGGTAGCCCAAATCCGTGTTTGACCAAGCCCCTT 105787 || | || |||| |||| | |||| ||| | | | |||| ||||| | || | Sbjct 8028 CATGTAGGGGCGTGTAGACCA--GAATGGTGGCCAAGAGCATTGTTGGACCAGGAACCCT 7971 Query 105788 TAAAATCGTAACTCATGAGAAATATTTTGCCTAATGACTTTTGCGCTTCGGCGTAGTTTA 105847 | || ||||| ||||| | || || | | | | ||| || || | ||||| || Sbjct 7970 TGAAGTCGTAGCTCATCAAGAAGATATGGTCCATGTACTGCTGAGCGGCCTTGTAGTCTA 7911 Query 105848 CCACGGCAATCTTGTCGTAACCCGCGCTTATAGCGCTTGTTAATTCGTAAACCCTGCCGG 105907 | || ||||||||| |||| ||||| || || || | |||||| | | || | Sbjct 7910 CGACCTGAATCTTGTCCCAACCAGCGCTGATGGCTGAGGTCAGTTCGTATTTCTTTCCAG 7851 Query 105908 TTTGCGCTTCGAGGTCGTCTAGCATTGCGCGCAGCTCCTCCAACAACAAAATGTATGTTT 105967 | | ||| || |||| | |||| | | || |||| || || | | ||| | Sbjct 7850 TCTTGGCTGACAGCTCGTTCAACATTTCTCTCAATTCCTTCATCAGCTGGACGTAGAT-- 7793 Query 105968 TGGCGTCACCGTC--CGCATCGCCCAACGACGGG-TTAGCCCCTTTGCCGCCCGGAAACT 106024 || |||||| || | |||| | ||| || || || || || || || |||| Sbjct 7792 ----GTGACCGTCTTCGGGACCACCAAGGTTGGGATTGGCTCCCTTACCACCAGGGAACT 7737 Query 106025 CCCAATCGATGTCTACACCGTCAAAGAATTTCCACACTTGCAGAAATTCCTTAACCGAAT 106084 ||||||| ||||| ||||| || ||||||||||| | || || ||||| || || Sbjct 7736 CCCAATCAATGTCAACACCATCGAAGAATTTCCAGGTCTCGAGGAAGTCCTTCACTGAGG 7677 Query 106085 CTACAAAAACGTTTCTTTTTTCAACATCG-TGCATAAAATAAAATGGGTCTGATAGAGTC 106143 | || || |||||| ||||| ||| || | || | ||| || || | || ||| Sbjct 7676 CGACGAAGCGGTTTCTCTTTTCCTTGTCGGTGAAGAAGAAGAAA-GGATCGGCCAGGGTC 7618 Query 106144 CAGCCTCCTATTGAAGGAAGAATTTTTAAATGGGGGTTTGCTAATTTTGCCGCCATCAAC 106203 || || || | ||||||||| || || | | || | || |||| | ||||||| Sbjct 7617 CATCCACCAACTGAAGGAAGGATCTTCAGGTCTGGTCTCGCCTGTTTTAACATCATCAAC 7558 Query 106204 TGTCCAAAATTGCCTTTATACGGCTCGTTCCAAGCGGACACACCTTTTTGGGGTTTTTGT 106263 || || || ||||| || || ||||||||||| || | || ||| ||||| ||||| || Sbjct 7557 TGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCAGGCAGTCAAACCCTTTTGTGGTTTCTGA 7498 Query 106264 ACGGCGGCCCACGGATCGTGAATGGCAACTTTGAAATCTTCGCGTCCCTTGCACGATCTT 106323 | || ||||| ||||| || || | |||||||| ||||| | ||| |||| ||| || Sbjct 7497 AGAGCAGCCCAAGGATCATGGATTGACACTTTGAAGTCTTCCCTGCCCCTGCATGATTTT 7438 Query 106324 TGCAAAGATTCAAAGCTTCCGGGTATCGTTTTGAGGGCGTCGTTTATTCCATCGCCGCCG 106383 |||| | || || || || ||| ||| | | |||||| || ||||| || ||| Sbjct 7437 TGCAGAATTTGGAAACTGCCTTCAATCTGTTTCAAGCTGTCGTTGATACCATCTCCACCG 7378 Query 106384 CAGATGGGTATGAAACCATACAACAAG-TGTGATAAATTTGGCAAGGGAACTTTGTCTAC 106442 || || || |||||||| || || ||| || | || ||| || | ||| || ||| || Sbjct 7377 CAAATTGGGATGAAACCGTA-AAGAAGATGAGTTAGATTAGGGATGGGCACGCGGTCAAC 7319 Query 106443 GGGAAAGTTGCGCCCGTACACACCCCACTCAACAAAGTACGCA 106485 ||||| || | | ||| |||||||| || || ||||| ||| Sbjct 7318 TGGAAACTTCCTCAGGTAGACACCCCATTCGACGAAGTATGCA 7276 >seq84480 Length=6514 Score = 190 bits (210), Expect = 2e-43 Identities = 340/491 (69%), Gaps = 4/491 (1%) Strand=Plus/Minus Query 105997 GGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056 ||||| || || || || || || ||||||||||| ||||| ||||| || ||||||||| Sbjct 5922 GGGTTGGCTCCCTTACCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 5863 Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGTTTCTTTTTTCAACATCG-TG 106115 || | || || ||||| || || | || || | |||| ||||| ||| || Sbjct 5862 CAGGTCTCGAGGAAGTCCTTCACTGAGGCGACGAAGCGGCTTCTCTTTTCCTTGTCGGTG 5803 Query 106116 CATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAAATG 106175 | || | |||| || || | || ||||| || || | |||||||| || || | | Sbjct 5802 AAGAAGA-AAAAGGGATCGGCCAGGGTCCATCCACCAACAGAAGGAAGGATCTTCAGGTC 5744 Query 106176 GGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTTCCA 106235 || | || ||| | ||||||||| || || ||||| || || ||||||||||| Sbjct 5743 TGGTCTCGCCTGTTTCAACATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCA 5684 Query 106236 AGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAACTTT 106295 | || ||| || || ||||| || | || ||||| ||||| || |||| ||||| Sbjct 5683 TGAACCCAAACCCTTCTGTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATGGACACTTT 5624 Query 106296 GAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGTTTT 106355 ||| ||||| | || |||| |||||||||| || || || || || ||| ||| Sbjct 5623 GAAGTCTTCCCTGCCGCTGCATGATCTTTGCAGAGCTTGGAAACTGCCTTCAATCTCTTT 5564 Query 106356 GAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAG-TGTG 106414 | |||||| || ||||| || ||||| || || |||||||| || || ||| || | Sbjct 5563 CAAACTGTCGTTGATGCCATCTCCACCGCAAATTGGGATGAAACCGTA-AAGAAGATGAG 5505 Query 106415 ATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTCAA 106474 || ||| || | || || ||| ||||| || || | | ||| |||||||| || | Sbjct 5504 TTAGATTGGGGATAGGCACACGGTCAACGGGGAACTTCCTCGGGTAGACACCCCATTCGA 5445 Query 106475 CAAAGTACGCA 106485 | ||||| ||| Sbjct 5444 CGAAGTATGCA 5434 >seq4167 Length=57674 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || ||||||||||||| || ||||| || || ||| || || | Sbjct 17554 AATGCAAATCTTTGTCAAAACATTGACTGGTAAAACAATAACTTTAGAAGTTGAGCCATC 17495 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || |||| ||||| || || ||||| | || ||| || Sbjct 17494 AGACACAATCGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCAGACCA 17435 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||| |||| ||||| || || || || ||||||||| | || | |||||||||| Sbjct 17434 GCAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACGCTTTCCGATTACAA 17375 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 |||||||||||||||||||||||| | ||| |||| Sbjct 17374 TATTCAGAAGGAATCTACTCTTCATTTAGTGCTACG 17339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28956 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 29015 || || ||||| || ||| | || || |||||||| ||||| || || || |||| Sbjct 18015 GTCAACATGCAGATCTTCGTGAAGACTTTGACGGGGAAAACAATCACTTTGGAGGTGGAA 17956 Query 29016 CCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 29075 ||| | || || | | || |||| || ||| || || ||||| | || Sbjct 17955 CCCTCTGATACCATCGAAAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCC 17896 Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || || || ||| | ||||| || || || |||||||||||| ||| | |||| Sbjct 17895 GACCAGCAGAGATTGATCTTCGCCGGAAAGCAACTGGAAGATGGACGCACTCTATCCGAC 17836 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 |||||||| |||||||||||||| |||||| ||||| Sbjct 17835 TACAATATCCAGAAGGAATCTACACTTCACCTGGTG 17800 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||| ||||| |||||||| || |||||| | Sbjct 17325 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACCATTACACTAGAGGTCGAACCCTCT 17266 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || |||| |||||| || || ||||| | || ||| || Sbjct 17265 GACACAATTGAAAATGTTAAAGCGAAAATTCAGGACAAGGAAGGAATACCTCCAGACCAG 17206 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || ||| | ||||| || || ||||| ||||||||| || | || | | ||||| | Sbjct 17205 CAGAGATTGATCTTCGCCGGTAAACAGCTGGAAGATGGTCGCACGCTCT--CTGATTATA 17148 Query 29140 ATATTCAGAAGGAATCTACTCTTCAC 29165 | || || ||||| |||||||||||| Sbjct 17147 ACATCCAAAAGGAGTCTACTCTTCAC 17122 >seq1544 Length=14195 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| ||||| || || ||||| ||| ||| ||||| | Sbjct 3942 ATGCAGATCTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCT 3883 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || ||| ||||| ||||| | ||| ||| ||| Sbjct 3882 GACACTATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 3823 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || | |||||||| || ||||| || |||||||| || | || | | || |||| Sbjct 3822 CAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACCCTTT--CTGACTACA 3765 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 | |||||||||||||||||||| || | || | || | |||||||| Sbjct 3764 ACATTCAGAAGGAATCTACTCTCCATCTTGTACTGCGTCTTCGAGGAGG 3716 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||| ||||| ||||| ||| ||| ||||| | Sbjct 5082 ATGCAGATTTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAACCTTCT 5023 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || ||| ||||| ||||| | || ||| || Sbjct 5022 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGATAAGGAAGGCATCCCTCCAGACCAG 4963 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || |||| ||||| || ||||||||||| |||||| || | || | | ||||||| Sbjct 4962 CAGCGACTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGTACCCTCT--CTGATTACA 4905 Query 29140 ATATTCAGAAGGAATCTACTCTTCA 29164 | || ||||||||||| ||||| || Sbjct 4904 ACATCCAGAAGGAATCCACTCTCCA 4880 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | ||||| |||||||| ||||| || || ||| || ||| | Sbjct 5311 AATGCAGATTTTCGTGAAAACCTTGACGGGTAAAACTATCACTCTTGAAGTTGAGCCCTC 5252 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || |||||| || |||||||| | || |||||| Sbjct 5251 AGACACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 5192 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || |||| ||||| || || || || || ||||| | || || | || ||||| Sbjct 5191 GCAGCGACTGATCTTCGCTGGAAAGCAGCTAGAAGACGGCCGCACACTGTCTGACTACAA 5132 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGT 29170 || |||||||||||||| || ||| |||| Sbjct 5131 CATCCAGAAGGAATCTACACTCCACTTGGT 5102 >seq4140 Length=56097 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | ||||| | ||||| |||||||| ||| ||| ||| | | Sbjct 50219 AATGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTGGAGGCTTC 50278 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | || | || ||| || || || || || | || |||||| Sbjct 50279 AGACACTATTGAGAATGTCAAAGCAAAGATCCAGGACAAGGAGGGAATCCCACCAGATCA 50338 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || |||||||||| || || ||||| |||| ||| | ||| | | || ||||| Sbjct 50339 GCAGCGACTTATCTTCGCTGGTAAACAGTTGGAGGATGGCCGCACTCTTTCTGACTACAA 50398 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTG-TTACGATTACGAGGAGG 29188 || ||||||||||| || |||||| ||||| ||| | ||| ||||||| Sbjct 50399 CATCCAGAAGGAATCCACCCTTCACTTGGTGCTTAGGCTTA-GAGGAGG 50446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427882983681245