Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2172 241 1e-58 seq84480 214 1e-50 seq4167 93.3 3e-14 seq1544 93.3 3e-14 >seq2172 Length=16819 Score = 241 bits (266), Expect = 1e-58 Identities = 637/962 (66%), Gaps = 13/962 (1%) Strand=Plus/Minus Query 97296 TAATCTACAACACCGTCCTCCCACGTGCCCGACACCGGCCC-GTTGCCAGTGCCGGAAAA 97354 || || || || || |||| |||||| ||| || || || || || | ||| | || Sbjct 8229 TAGTCCACCACTCCCTCCTGCCACGTTCCCTTAACTGGGCCAGTAGCTAC-GCCAGTGAA 8171 Query 97355 ATAGTTGCCATTCGTATAATTTGTTACGCCGGTCCAGCCGCGGCCGTACATGGCGACGCC 97414 |||||||| | | || |||| || |||||||| | || |||||||| || || Sbjct 8170 TGGGTTGCCATCCTTGTAGCCATTTACTCCAGTCCAGCCTCTTCCATACATGGCAACACC 8111 Query 97415 CACAATTATTTTGTTGGGATCGACGCCTTGTTCCAGTAACGCATCGACAGCGTAATGTGT 97474 || | || || |||| ||| ||||| ||| | | | |||| || | | || Sbjct 8110 AACGACGATCTTCTTGGAGCTGACTCCTTGAGCCAAGAGAGATTTGACACCGAAGTCAGT 8051 Query 97475 AGTGTACAGCTCT-TCCGAGTTCCAACTTGGCGCGT--AGACTGTTGTTTGGTAGCCCAA 97531 ||||| ||| | || |||||| | || |||| |||| | |||| ||| | Sbjct 8050 TGTGTATGTCTCGCTGCG-GTTCCATGTAGGGGCGTGTAGACCA--GAATGGTGGCCAAG 7994 Query 97532 ATCCGTGTTTGACCAAGCCCCTTTAAAATCGTAAGTCATGAGAAATATTTTGTCTAATGA 97591 | | |||| ||||| | || || || ||||| |||| | || || | ||| | | Sbjct 7993 AGCATTGTTGGACCAGGAACCCTTGAAGTCGTAGCTCATCAAGAAGATATGGTCCATGTA 7934 Query 97592 CTTTTGCGCTTCGGCGTAGTTTACCACGGCAATCTTGTCGTAGCCCGCGCTTATAGCGCT 97651 || || || | ||||| ||| || ||||||||| | || ||||| || || Sbjct 7933 CTGCTGAGCGGCCTTGTAGTCTACGACCTGAATCTTGTCCCAACCAGCGCTGATGGCTGA 7874 Query 97652 TGTTAATTCGTAAACCCTGCCGGTTTGCACTTCGAGGTCGTCTAGCATTTCGCGCAGCTC 97711 || | |||||| | | || || | || || |||| | |||||| | || || Sbjct 7873 GGTCAGTTCGTATTTCTTTCCAGTCTTGGCTGACAGCTCGTTCAACATTTCTCTCAATTC 7814 Query 97712 ATCCAACAACAGAATGTATGTTTTGGCGTCACGCTCCGCATCGCCCAGCGACGGGTTAGC 97771 | || || | | | ||| | | |||| || | | | || || || || || Sbjct 7813 CTTCATCAGCTGGACGTAGATGTGACCGTCT---TCGGGACCACCAAGGTTGGGATTGGC 7757 Query 97772 CCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTCCACACTTG 97831 || || || || || || |||||||| | ||| |||||||| || |||||||| | Sbjct 7756 TCCCTTACCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTCCAGGTCTC 7697 Query 97832 CAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTCGTGCATGAAATA 97891 | || ||||| || || | || || |||||| ||||| |||| | ||| | Sbjct 7696 GAGGAAGTCCTTCACTGAGGCGACGAAGCGGTTTCTCTTTTCCTTGTCGGTGAAGAAGAA 7637 Query 97892 GAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATGTGGGTTTGC 97951 ||| || || | ||| ||||| || || | ||||||||| || || || | ||| | || Sbjct 7636 GAAAGGATCGGCCAGGGTCCATCCACCAACTGAAGGAAGGATCTTCAGGTCTGGTCTCGC 7577 Query 97952 TAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCAAGCGGACAC 98011 ||| | |||||| || || || ||||| ||||| || |||||||| || | || Sbjct 7576 CTGTTTTAACATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCAGGCAGTCAA 7517 Query 98012 GCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTTGAAATCTTC 98071 |||||||| ||||| || | || ||||| ||||| ||||| | |||||||| ||||| Sbjct 7516 ACCCTTTTGTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATTGACACTTTGAAGTCTTC 7457 Query 98072 GCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTTGAGGGCGTC 98131 | |||||||| ||| ||||||| || ||||| || || ||| | | ||| Sbjct 7456 CCTGCCCCTGCATGATTTTTGCAGAATTTGGAAACTGCCTTCAATCTGTTTCAAGCTGTC 7397 Query 98132 GTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAG-TGCGATAAATTTG 98190 ||| || ||||| |||||||| || || ||||||||||| || ||| || | || ||| | Sbjct 7396 GTTGATACCATCTCCACCGCAAATTGGGATGAAACCGTA-AAGAAGATGAGTTAGATTAG 7338 Query 98191 GCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGACAAAGTACG 98250 | | ||| || ||| || ||||| | | | ||| |||||||| ||||| ||||| | Sbjct 7337 GGATGGGCACGCGGTCAACTGGAAACTTCCTCAGGTAGACACCCCATTCGACGAAGTATG 7278 Query 98251 CA 98252 || Sbjct 7277 CA 7276 >seq84480 Length=6514 Score = 214 bits (236), Expect = 1e-50 Identities = 343/490 (70%), Gaps = 2/490 (0%) Strand=Plus/Minus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 ||||| || || || || || || || |||||||| | ||| |||||||| || |||||| Sbjct 5922 GGGTTGGCTCCCTTACCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAATTTC 5863 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTCGTGC 97883 || | | || ||||| || || | || || | |||| ||||| |||| Sbjct 5862 CAGGTCTCGAGGAAGTCCTTCACTGAGGCGACGAAGCGGCTTCTCTTTTCCTTGTCGGTG 5803 Query 97884 ATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATGT 97943 | ||| | || || || | ||| ||||| || || | |||||||| || || || | | Sbjct 5802 AAGAAGAAAAAGGGATCGGCCAGGGTCCATCCACCAACAGAAGGAAGGATCTTCAGGTCT 5743 Query 97944 GGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCAA 98003 || | || |||| | |||||| || || || ||||| ||||| || |||||||| Sbjct 5742 GGTCTCGCCTGTTTCAACATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTTCCAT 5683 Query 98004 GCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTTG 98063 | || ||||| || ||||| || | || ||||| ||||| ||||||| |||||| Sbjct 5682 GAACCCAAACCCTTCTGTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATGGACACTTTG 5623 Query 98064 AAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTTG 98123 || ||||| | || ||||| |||| ||||||||||| ||||| || || ||| Sbjct 5622 AAGTCTTCCCTGCCGCTGCATGATCTTTGCAGAGCTTGGAAACTGCCTTCAATCTCTTTC 5563 Query 98124 AGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAG-TGCGA 98182 | |||||| || ||||| |||||||| || || ||||||||||| || ||| || | Sbjct 5562 AAACTGTCGTTGATGCCATCTCCACCGCAAATTGGGATGAAACCGTA-AAGAAGATGAGT 5504 Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242 || ||| || | || || ||| ||||| || | | | ||| |||||||| ||||| Sbjct 5503 TAGATTGGGGATAGGCACACGGTCAACGGGGAACTTCCTCGGGTAGACACCCCATTCGAC 5444 Query 98243 AAAGTACGCA 98252 ||||| ||| Sbjct 5443 GAAGTATGCA 5434 >seq4167 Length=57674 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || ||||||||||||| || ||||| || || ||| || || | Sbjct 17554 AATGCAAATCTTTGTCAAAACATTGACTGGTAAAACAATAACTTTAGAAGTTGAGCCATC 17495 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | || | || ||||| || || ||||| | || ||| || Sbjct 17494 AGACACAATCGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCAGACCA 17435 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| |||| ||||| || || || || |||||||| | || | |||||||||| Sbjct 17434 GCAACGACTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACGCTTTCCGATTACAA 17375 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||| ||||||||||||||||| | ||| |||| Sbjct 17374 TATTCAGAAGGAATCTACTCTTCATTTAGTGCTACG 17339 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||||||| |||| || |||| ||||| ||||| || ||| ||| || | Sbjct 17097 ATGCAAATATTCGTCAAGACTCTGACTGGCAAGACCATAACACTAGAAGTTGAAGCCTCT 17038 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| |||||| || || ||||| | || || ||| Sbjct 17037 GATACAATTGAAAATGTCAAAGCAAAAATCCAGGACAAGGAAGGAATTCCTCCTGACCAA 16978 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||||||| || || |||||||| ||||||||| || | |||| |||||| Sbjct 16977 CAGCGACTTATTTTCGCCGGCAAACAGTTGGAAGATGGGCGTACGTTATCCGACTACAAT 16918 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || || ||||| || |||||| | || || || Sbjct 16917 ATCCAGAAAGAATCAACGCTTCACTTAGTATTGCG 16883 >seq1544 Length=14195 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| ||||| || || ||||| ||| ||| ||||| | Sbjct 3942 ATGCAGATCTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCT 3883 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| ||||| ||||| | ||| ||| ||| Sbjct 3882 GACACTATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 3823 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || | |||||||| || ||||| || ||||||||| || | || | | || |||| Sbjct 3822 CAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACCCTTT--CTGACTACA 3765 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | ||||| |||||||||||||| || | || | || | |||||||| Sbjct 3764 ACATTCAGAAGGAATCTACTCTCCATCTTGTACTGCGTCTTCGAGGAGG 3716 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| ||||| ||||||||||| ||| ||| || ||| | Sbjct 3258 ATGCAGATCTTTGTCAAAACCTTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCCTCT 3199 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| || || ||||| | ||| ||| || Sbjct 3198 GATACCATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCAGACCAG 3139 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||| || || |||||||| ||||||||| || | | || ||||| Sbjct 3138 CAGCGTCTTATTTTCGCCGGCAAACAGTTGGAAGATGGACGCACCCTTTCTGACTACAAC 3079 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || ||||| ||||| ||||| ||| |||| || || Sbjct 3078 ATCCAAAAAGAATCCACTCTCCACTTGGTCTTGCG 3044 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| ||||| || || ||||| ||| ||| ||||| | Sbjct 4398 ATGCAGATCTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCT 4339 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || ||||| || ||| || || ||||| | ||| || || Sbjct 4338 GACACTATTGAGAATGTCAAGGCCAAGATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 4279 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || | || ||||| || ||||| || ||||||||| || | || | |||| |||| Sbjct 4278 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAAGATGGTCGTACGCTTT--CCGACTACA 4221 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||| ||||||||||| || |||||| |||| || || Sbjct 4220 ATATCCAAAAGGAATCCACCCTTCACTTGGTCTTGCG 4184 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| ||||| || || ||||| ||| ||| ||||| | Sbjct 3486 ATGCAGATTTTTGTCAAAACCTTGACTGGTAAGACCATCACCCTCGAGGTTGAACCTTCG 3427 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || | ||| || || || || ||||| | ||| || || Sbjct 3426 GACACGATTGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAG 3367 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | |||||||| || ||||| || ||||||||| || | |||| |||||| Sbjct 3366 CAGCGTCTTATCTTCGCCGGCAAGCAGTTGGAAGATGGACGCACCCTTTCCGACTACAAT 3307 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || ||||||||||| || |||||| |||| || || Sbjct 3306 ATCCAAAAGGAATCCACCCTTCACTTGGTCTTGCG 3272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410362333473506