Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4167 95.1 2e-14 seq5491 84.2 3e-11 >seq4167 Length=57674 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127 ||| || || | ||| |||||||| ||| ||||||||||| || || | | ||| || Sbjct 14152 TACTAAGTGGAGAGTGGATTCTTTCTGTATGTTATAATCTGAGAGCGTACGACCATCTTC 14211 Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || ||||| || |||||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct 14212 CAACTGTTTGCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGGATCCCCTCTTTGTCTTG 14271 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||| | | || ||||| || |||||||| || ||||| || || || Sbjct 13907 CCACCTCTAAGACGAAGGACTAAATGCAACGTAGATTCCTTCTGAATATTGTAGTCGGAT 13966 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || |||||||| || || |||||||| || ||||| || || || Sbjct 13967 AACGTGCGTCCATCTTCCAATTGTTTGCCGGCGAAAATCAACCTCTGCTGGTCTGGGGGG 14026 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| ||||| Sbjct 14027 ATTCCCTCTTTGTCTTG 14043 >seq5491 Length=1589472 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 10493 TATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAA 10552 |||| ||||||||| ||||| |||||||| || || ||||||||||| | | ||||| Sbjct 280906 TATTACAGCTGGAGTCATTGATGAAGATTACAGGGGTAATGTGGGAGTTGTTATCTTTAA 280847 Query 10553 TCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGA 10612 ||| ||| | |||| ||| | | || | || ||||| || | ||| |||| ||||| Sbjct 280846 TCACTCTGACAAAGACTTTGAAGTCAAGAAGGGTGATAGGATCGCACAACTAATTTGTGA 280787 Query 10613 AAAAAT 10618 || ||| Sbjct 280786 AAGAAT 280781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742719869031680