Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq84480 181 9e-41 seq2172 181 9e-41 >seq84480 Length=6514 Score = 181 bits (200), Expect = 9e-41 Identities = 635/977 (65%), Gaps = 21/977 (2%) Strand=Plus/Minus Query 35876 GCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCT 35935 ||||||| ||||||||| ||||| |||| | |||||| ||| ||| || || ||| Sbjct 6399 GCAATCTCTCTGTAGTCCACCACTCCGTCCTGCCATGTTCCCTTGACTGGGCCAGTAGCT 6340 Query 35936 ACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTAC 35995 |||||| ||||||| ||| || |||||| || || || |||||||| || |||||| Sbjct 6339 ACGCCAGTGAATGGGTTGCCATCCTTGTAGCCGTTCACTCCAGTCCAACCTCGTCCGTAC 6280 Query 35996 ATTGCTACGCCCAACACGAGtttttttGGATTCACTCGTTGCGC---GAGCAAAGCGTCC 36052 || || || || | || | || || || | |||| ||| || ||| || | Sbjct 6279 ATAGCAACACCGACGACAATCTTCTTGGGGCTGACTCCTTGAGCCAAGAGGAAT---TTA 6223 Query 36053 ACGGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTC 36112 || | | || | ||||| | || || | ||||| || | | | || | | | Sbjct 6222 ACACCGAAGTCAGTTGTGTATGTCTCCTTGCGGTTCCATGCAGGGGCATGTAGACCAGCC 6163 Query 36113 TGATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATT 36172 || || || || | || ||||| || || ||||| || || ||||||| || || Sbjct 6162 TGGTGGCCAAGCGTGTCGTTGGACCAGGCACCCTTGAAGTCGTAGCTCATCAAAAAGATG 6103 Query 36173 TTATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCG 36232 | ||| | ||||| || || | ||| | ||| | |||||||| |||| | Sbjct 6102 TGATCCATGTACTGCTGAGCGGCCTTGTAGTCAACAACCTGAATCTTGTCCCAACCAGAG 6043 Query 36233 CTAATCGCTGTGGTGAGTTCTAAAGTACGATTC-GT-TTGTATTTGAACTTGATCGAGCA 36290 || || |||| ||| ||||| | | | | | || ||| | | || | || | || Sbjct 6042 CTGATGGCTGAGGTCAGTTCGTATTT-CTTTCCAGTCTTGGCTGACAGCTCGTTCAA-CA 5985 Query 36291 TGGCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTC-GCGTTCCACATCGCCA 36349 | | | |||||| || | | | |||| ||| | | ||| | | || Sbjct 5984 TCTCTCTCAATTCCTTCATCA----GCTGCACGTAGATTTGACCGTCTTCGGGACCACCT 5929 Query 36350 ACGTTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAA 36409 | || || ||||| || || || || || || ||||||||||| || | || ||||| Sbjct 5928 AGGTCGGGGTTGGCTCCCTTACCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAG 5869 Query 36410 AATTTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCA 36469 |||||||| ||| | || || ||| || |||| || || | || | Sbjct 5868 AATTTCCAGGTCTCGAGGAAGTCCTTCACTGAGGCGACGAAGCGGCTTCTCTTTTCCTTG 5809 Query 36470 TCG-TGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTT 36528 ||| || | | || | |||||||||| ||| ||||| || || | || | | | || Sbjct 5808 TCGGTGAAGAAGAAA-AAGGGATCGGCCAGGGTCCATCCACCAACAGAAGGAAGGATCTT 5750 Query 36529 TAGATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTC 36588 || | || | ||| ||| ||| || || || || ||||| ||||| || || Sbjct 5749 CAGGTCTGGTCTCGCCTGTTTCAACATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTC 5690 Query 36589 GTTCCATG--CGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATG 36646 |||||||| | | ||| ||| | |||||||| || || || ||||| ||||| || ||| Sbjct 5689 GTTCCATGAACCCAAAC-CCT-TCTGTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATG 5632 Query 36647 GAAACTTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTG 36706 || ||||| || | |||||||| ||| |||||||||| |||| ||||| || Sbjct 5631 GACACTTTGAAGTCTTCCCTGCCGCTGCATGATCTTTGCAGAGCTTGGAAACTGCCTTCA 5572 Query 36707 ATAGATTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAA 36766 || ||| ||||||||||| || || || || |||||||| || || || ||||| | | Sbjct 5571 ATCTCTTTCAAACTGTCGTTGATGCCATCTCCACCGCAAATTGGGATGAAACCGTAAAGA 5512 Query 36767 ATGTGCGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCC 36826 | || | || || || | ||||| ||| ||||| || | ||| || ||| Sbjct 5511 AGATGAGTTAGATTGGGGATAGGCACACGGTCAACGGGGAACTTCCTCGGGTAGACACCC 5452 Query 36827 CATTCGACAAAATAGGC 36843 |||||||| || || || Sbjct 5451 CATTCGACGAAGTATGC 5435 >seq2172 Length=16819 Score = 181 bits (200), Expect = 9e-41 Identities = 630/972 (65%), Gaps = 11/972 (1%) Strand=Plus/Minus Query 35876 GCAATCTGTCTGTAGTCGACCACGCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCT 35935 ||||||| ||||||||| ||||| || | | ||| || ||| | | || || ||| Sbjct 8241 GCAATCTCTCTGTAGTCCACCACTCCCTCCTGCCACGTTCCCTTAACTGGGCCAGTAGCT 8182 Query 35936 ACGCCACTGAATGGATTGTCACTGTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTAC 35995 |||||| ||||||| ||| || |||||| | || || ||||| || | || ||| Sbjct 8181 ACGCCAGTGAATGGGTTGCCATCCTTGTAGCCATTTACTCCAGTCCAGCCTCTTCCATAC 8122 Query 35996 ATTGCTACGCCCAACACGAGtttttttGGAT-TCACTCGTTGCGCGAGCAAAGCGTCCAC 36054 || || || || | |||| | || ||||| | |||| ||| || | | || | || Sbjct 8121 ATGGCAACACCAACGACGA-TCTTCTTGGAGCTGACTCCTTGAGCCAAGAGAGATTTGAC 8063 Query 36055 GGCCACGTTGGCGGTGTACGGTTCGTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTG 36114 | | || | ||||| | ||| | | ||||| | | ||| || | | || Sbjct 8062 ACCGAAGTCAGTTGTGTATGTCTCGCTGCGGTTCCATGTAGGGGCGTGTAGACCAGAATG 8003 Query 36115 ATGACCGAGATCGGTATTAGACCAAGCTCCTTTGAAATCATAACTCATCACGAAAATTTT 36174 || || ||| | | || ||||| | || ||||| || || ||||||| ||| || | Sbjct 8002 GTGGCCAAGAGCATTGTTGGACCAGGAACCCTTGAAGTCGTAGCTCATCAAGAAGATATG 7943 Query 36175 ATCTAAATACTGTTGTGCTCGGTCGTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCT 36234 || | ||||| || || | ||| | || | |||||||| |||||||| Sbjct 7942 GTCCATGTACTGCTGAGCGGCCTTGTAGTCTACGACCTGAATCTTGTCCCAACCAGCGCT 7883 Query 36235 AATCGCTGTGGTGAGTTCTAAAGTACGATTC-GT-TTGTATTTGAACTTGATCGAGCATG 36292 || |||| ||| ||||| | | | | | || ||| | | || | || | ||| Sbjct 7882 GATGGCTGAGGTCAGTTCGTATTT-CTTTCCAGTCTTGGCTGACAGCTCGTTCAA-CATT 7825 Query 36293 GCGCGCAATTCGCCCAATAAAGCGATATACGTGTTATTGTCGCGTTCCACATCGCCAACG 36352 | | |||||| || | || || ||| | ||| ||| | | |||| | Sbjct 7824 TCTCTCAATTCCTTCATCAGCTGGACGTAGATGTGACCGTC---TTCGGGACCACCAAGG 7768 Query 36353 TTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAAT 36412 || |||||||| || || || || || || ||||||||||| || | || ||||| ||| Sbjct 7767 TTGGGATTGGCTCCCTTACCACCAGGGAACTCCCAATCAATGTCAACACCATCGAAGAAT 7708 Query 36413 TTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCATCG 36472 ||||| ||| | || || ||| || |||| || | || | || | ||| Sbjct 7707 TTCCAGGTCTCGAGGAAGTCCTTCACTGAGGCGACGAAGCGGTTTCTCTTTTCCTTGTCG 7648 Query 36473 -TGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAG 36531 || | | || |||| ||||||| ||| ||||| || || | ||| | | | || || Sbjct 7647 GTGAAGAAGA-AGAAAGGATCGGCCAGGGTCCATCCACCAACTGAAGGAAGGATCTTCAG 7589 Query 36532 ATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTT 36591 | || | ||| |||| ||| || || || || ||||| ||||| || ||||| Sbjct 7588 GTCTGGTCTCGCCTGTTTTAACATCATCAACTGGCCGAAGTTGCCCTTGTAAGGCTCGTT 7529 Query 36592 CCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAAC 36651 ||| || | | || |||||||||| || || || ||||| ||||| || || || || Sbjct 7528 CCAGGCAGTCAAACCCTTTTGTGGTTTCTGAAGAGCAGCCCAAGGATCATGGATTGACAC 7469 Query 36652 TTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGA 36711 ||| || | |||||||| ||| ||| |||||| || ||||| || || Sbjct 7468 TTTGAAGTCTTCCCTGCCCCTGCATGATTTTTGCAGAATTTGGAAACTGCCTTCAATCTG 7409 Query 36712 TTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTG 36771 ||| || |||||||| ||||| || || |||||||| || || || ||||| | || || Sbjct 7408 TTTCAAGCTGTCGTTGATACCATCTCCACCGCAAATTGGGATGAAACCGTAAAGAAGATG 7349 Query 36772 CGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTC 36831 | || || || ||||||| ||| || ||||| | ||| || |||||||| Sbjct 7348 AGTTAGATTAGGGATGGGCACGCGGTCAACTGGAAACTTCCTCAGGTAGACACCCCATTC 7289 Query 36832 GACAAAATAGGC 36843 ||| || || || Sbjct 7288 GACGAAGTATGC 7277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417861593715680