Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4228 574 7e-159 seq5451 93.3 6e-14 >seq4228 Length=62806 Score = 574 bits (636), Expect = 7e-159 Identities = 1223/1800 (68%), Gaps = 42/1800 (2%) Strand=Plus/Minus Query 78696 CTTTATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAG 78755 ||||| |||| || || | || ||||| |||| | || ||||| || || || Sbjct 20110 CTTTACCTTAGATTTATCAACAGTAAATTGTATGGCATTCACAGCAGGTTTTGTGCGAAG 20051 Query 78756 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTT 78815 ||||||||||| ||||| | ||| | ||||| | |||||||| ||| | | ||| Sbjct 20050 GTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAATGAATAGATGACAATTT 19991 Query 78816 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 78875 || | || || || | ||||||||| | || || ||||||||||| || || || Sbjct 19990 ACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTTTGATCGATAAATGCACC 19931 Query 78876 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AA 78934 ||||| |||||||||| ||| | || ||| | ||||||||| | ||||||||| || Sbjct 19930 TCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCCCAGACAGTTTTATACAA 19871 Query 78935 CTCGCTTAATATCTTCTGGAAG-GTTTGTATTCT--GAATGGATCCACCATCTGCCATAA 78991 || |||| | |||| |||| | || || || |||| |||||| || || | Sbjct 19870 GTCTCTTATT-TCTTTAGGAATAGATTCAATGCTTTGAATAGATCCATTATTGTGGATTA 19812 Query 78992 TCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGAGATGC 79050 | ||| || || ||||| | |||||| | || |||||| | | ||| || || Sbjct 19811 TAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAAATCATGTAACAAG-TGA 19753 Query 79051 GGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATAT 79110 |||| || ||||| || || || ||||| || | | ||| || || ||| | Sbjct 19752 TGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTATATGTTTGATGTAAAA 19693 Query 79111 GGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCC 79170 ||||| | ||||||||||||||||| || || || || || || |||||||||||||| Sbjct 19692 GGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGCAGTTGGCATAGGTGCT 19633 Query 79171 ACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAAT 79228 | ||||| |||||||||||| ||| | || || || |||||||| || ||||| | Sbjct 19632 AGCAATAGTGAATTTCTAAGACC--ATGTTTTGCAATCTTCTCTTTTAGTGAATCCCAGT 19575 Query 79229 CCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGC-- 79286 |||| | ||| | ||| ||||| | ||||| || | ||||| | || || Sbjct 19574 CCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAATATACCTTGGCTTGCAG 19515 Query 79287 GTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTC 79346 | || ||| || || ||||| ||| | ||| |||||||||||||| || ||||| Sbjct 19514 GGCTG--CCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTCACAGCTAGCCTC 19457 Query 79347 TAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCTAGGC 79405 | ||| || || || || ||||| || || | | ||| | || || | || || || Sbjct 19456 CAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATTTTATAGCAGCTTCGC 19398 Query 79406 TATCAAATGG-ATAAT--TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATAC 79462 | ||| |||| || |||| || ||| || || |||||||||||||| ||||| | Sbjct 19397 TTTCATATGGTATGCGCATTAA---AACAAAAGCATCAGCTAATCCTTGAACTCCAATTC 19341 Query 79463 CGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATAT 79522 | || ||||| || ||| |||| || ||| || ||||| | || ||| | || | || Sbjct 19340 CAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGGTAAAAGTTCACAT 19281 Query 79523 CTATAATTTTATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAA 79581 | |||||||| || |||||| | | | || ||| | || || || | ||||| |||| Sbjct 19280 CAATAATTTTGTTCAGATTC-TCAGTTATAGTTTTAGTGACTTCTTTCAATTTGATAAAA 19222 Query 79582 TCAAATCGTC---CATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACG 79638 | || | |||| |||||||||| || || || | || || | ||| || || Sbjct 19221 TTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATTGAAGCTAAATTGCAGACA 19162 Query 79639 GCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATG 79698 || || |||| || | ||||| || ||||||||||| ||||| || || |||||| Sbjct 19161 GCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTTGCTGCATTTAATG 19102 Query 79699 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGA 79758 || |||| ||| | || ||||| ||| |||| || | ||| |||||||| ||| | || Sbjct 19101 GTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATAAAGCATGTATGGT 19042 Query 79759 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGA----GCCTTTAT 79814 || || ||||||| || | ||| || || |||||||| | || || || || | Sbjct 19041 GTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTGAGCTCGCACTTGT 18982 Query 79815 TATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCC 79874 | || | | | ||| ||| |||| ||| ||| ||| || || ||||| Sbjct 18981 TTTACA----AAGCGACCTTCCTGTTCATATTTCTCATACAATGCTTCAAATTCTTCTCC 18926 Query 79875 CCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATC 79934 |||| |||| ||| ||||| || || | ||||||||| | ||| ||| || | Sbjct 18925 CCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAATCTTGAT--TA 18868 Query 79935 CTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 79992 |||| |||| ||||||||| | ||| || ||||| | || ||| || || || | Sbjct 18867 CTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGTTCCCTAGCA 18808 Query 79993 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 80052 | || || || || ||||||||||| | ||| || || | | || |||| |||| Sbjct 18807 CGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATGTCAGCATGC 18748 Query 80053 CACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTAT 80112 || |||||||| |||||||| | | || |||| ||| || ||||| ||||| | ||| Sbjct 18747 CATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGATCGACGTAA 18688 Query 80113 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 80172 | || ||||| || |||||||| ||||| || | || |||||| || |||||| || Sbjct 18687 CGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACACCATTTGTA 18628 Query 80173 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 80232 || | ||||| | || ||| | |||| || || || || || ||||| Sbjct 18627 CCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGCCAATCCCACCTGCT 18568 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 |||||| |||| ||| ||| |||||| |||||||| || || || || |||||||| Sbjct 18567 GATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAATACTATCATCT 18508 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 80352 ||||| | || || || ||||| ||| |||| || | || | | | ||| Sbjct 18507 TTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCGCTGC-TGAGAAAAG 18449 Query 80353 -GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGA 80411 || || || || ||||| |||||||||| |||| |||||| || | ||||||| Sbjct 18448 AGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATGTGTTAATAGCTCC 18389 Query 80412 TTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471 || ||||| |||||| || | | || | ||| | ||||||||| || ||||| Sbjct 18388 GTCAATATCTTCACCATGAATGCCAATGGAAACCCTCATGAGCATGTGCTGCGGCCTTTC 18329 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 ||||| ||||| ||||||| ||| || | ||| | ||| || || | || ||||||||| Sbjct 16052 TTTTTGGTTTCTTTGTGTAAATTAGAAATGGCCAATCTTGCAGCAAGTATTGCATAATCT 15993 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| | ||||| || |||||| ||||||| || | | || | ||| || ||| Sbjct 15992 GGATGATCAGTAGTCATGGTTGCTGCTGTTTCGGCAGCTAAGTTATCAAGTTCCACAGTT 15933 Query 80809 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTAT 80849 || ||||| ||||| || ||| || |||| || ||| Sbjct 15932 GTCACTCCCGAGTATATCCCACTGATGACTTTCAGAGTTAT 15892 >seq5451 Length=979821 Score = 93.3 bits (102), Expect = 6e-14 Identities = 246/375 (66%), Gaps = 3/375 (1%) Strand=Plus/Plus Query 173685 TTTCTGTTATGACTCCAATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGG 173744 ||||| |||||||||| | || ||||| || ||| | || | || || | | || Sbjct 213638 TTTCTCTTATGACTCCTGTGCTACCAATGTTGGCTGAAGCTTGCAAATCAGTGGAAATGG 213697 Query 173745 CGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTAC 173804 | | ||||| | ||| |||||||| | ||| | ||||| || ||||||||||| | Sbjct 213698 CAATGAAAAAGTGTCCCAATGGAATGTTCTCAGAAATAAAATATGACGGTGAAAGAGTGC 213757 Query 173805 AAGTTCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCT 173864 |||| || ||||| || ||||| | || ||| | |||||||| | Sbjct 213758 AAGTGCACAAAAAAGGGAATGAGTTCAAATATTTCTCAAGAGCGTTAAAACCAGTTATGG 213817 Query 173865 CTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTA 173924 | || ||||| | || |||| || || ||||| |||| || ||||| |||| | Sbjct 213818 CACACAAAGTCAGTCATTTCAAGGATTATTTACCGCAAGCTTTCCCAAAAGGTACGGACA 213877 Query 173925 TCATATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTG 173981 | ||| ||||| ||||| || | | ||||| | ||| || || | || || | Sbjct 213878 TGATACTGGATGCTGAAGTTTTGATGGTAGATGTGAATACTGGGAAGCCATTGCCATTCG 213937 Query 173982 GAAGTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGT 174041 | | |||||| |||| || | ||||| ||| | | | ||||| ||| | | | Sbjct 213938 GTACATTAGGTGTACATAAGCGGTCAGAATTCAAAGATGCACAAGTGTGTCTGTACATAT 213997 Query 174042 TTGACTGTTTGTACT 174056 ||||||||||||||| Sbjct 213998 TTGACTGTTTGTACT 214012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717489666897560