Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4228 526 3e-144 seq5451 89.7 7e-13 >seq4228 Length=62806 Score = 526 bits (582), Expect = 3e-144 Identities = 1173/1747 (67%), Gaps = 32/1747 (2%) Strand=Plus/Minus Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886 ||| || || || |||||||| |||||||| | ||| | ||||| | || ||||| || Sbjct 20062 TTTTGTGCGAAGGTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAATGAAT 20003 Query 70887 ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATC 70946 | | | ||| ||| | || || || | || ||||| | ||||| |||||||| Sbjct 20002 AGATGACAATTTACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTTTGATC 19943 Query 70947 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAAT 71006 ||| || || || ||||| |||||||||| ||| | || ||| | ||||||||| | Sbjct 19942 GATAAATGCACCTCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCCCAGAC 19883 Query 71007 AGTTTTATA-AACTCGCTTAATATCTTCTGGAAG-GTTTGTATTCT--GAATGGATCCAC 71062 ||||||||| || || |||| | |||| |||| | || || || |||| |||||| Sbjct 19882 AGTTTTATACAAGTCTCTTATT-TCTTTAGGAATAGATTCAATGCTTTGAATAGATCCAT 19824 Query 71063 CATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAAC-T 71121 || || || |||||| || ||||| | |||||| | || |||||| | | Sbjct 19823 TATTGTGGATTATAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAAATCAT 19764 Query 71122 CTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATA 71181 ||| || ||| |||| || ||||| || || || ||||| || | | ||| || Sbjct 19763 GTAACAAG-TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGTATATG 19705 Query 71182 TTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 71241 || ||| | ||||| | ||| |||||||||||||| || || || || || ||||| Sbjct 19704 TTTGATGTAAAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAGCAGTT 19645 Query 71242 GGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGA 71301 ||||||||||| | |||||| |||||||||||||||| | || || |||||||| Sbjct 19644 GGCATAGGTGCTAGCAATAGTGAATTTCTAAGACCATGTTTTGCAATCTTCTCTTTTAGT 19585 Query 71302 GATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCG 71361 || ||||| | ||| | ||| | ||| || || Sbjct 19584 GAATCCCAGTCCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAATATACCT 19525 Query 71362 TTACTAGC--GTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCAC 71419 | || || | || ||| |||| || || ||| ||| | || ||||||| ||||| Sbjct 19524 TGGCTTGCAGGGCTG--CCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAATTCAC 19467 Query 71420 AACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGT- 71478 | || ||||| | ||| ||||| || || ||||| || || | | ||| | || || | Sbjct 19466 AGCTAGCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATTTTATA 19408 Query 71479 ---GCTTCCGGGCTATCAAATGG-AT--AATTTAAGAGAATAAACGCGTCTGCTAATCCT 71532 ||||| ||| ||| |||| || |||| || ||| || || ||||||||| Sbjct 19407 GCAGCTTC---GCTTTCATATGGTATGCGCATTAA---AACAAAAGCATCAGCTAATCCT 19354 Query 71533 TGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGA 71592 ||||| ||||| || || |||||||| ||| |||| || ||| || ||||| | || Sbjct 19353 TGAACTCCAATTCCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCACTGGG 19294 Query 71593 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGA-CCACATCCTT 71651 ||| | || | ||| |||||||| || ||| |||| | | || ||| | || || || Sbjct 19293 TAAAAGTTCACATCAATAATTTTGTTCAGA-TTCTCAGTTATAGTTTTAGTGACTTCTTT 19235 Query 71652 TAGTTTGAGAAAATCAAA---TCTCCCATCTATTACAAACACGTTCAAGGCAACAGATGC 71708 | ||||| ||||| | | | |||| ||||||||| || || |||| || || Sbjct 19234 CAATTTGATAAAATTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATTGAAGC 19175 Query 71709 CAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATT 71768 | ||| || || || || |||| || | ||||| || ||||||||||||||| || Sbjct 19174 TAAATTGCAGACAGCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTT 19115 Query 71769 ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 71828 || || || ||||| |||| ||| | || ||||| ||| |||| || | ||| ||||| Sbjct 19114 GCTGCATTTAATGGTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATA 19055 Query 71829 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 71888 ||| || | || || || ||||||| || | ||| || || |||||||| | || | Sbjct 19054 AAGCATGTATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTG 18995 Query 71889 AGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAA 71948 ||| | | || | | ||| ||| |||| ||| ||| ||| || Sbjct 18994 AGCTCGCACTTGTTTTACAAAGCGACCTTCCTGTTCATATTTCTCATACAATGCTTCAAA 18935 Query 71949 CTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTC 72008 || ||||||||| || | ||| ||||| || |||| |||||||| | ||| || Sbjct 18934 TTCTTCTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAATC 18875 Query 72009 TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 72068 | || | | |||| ||||||||| | ||| || ||||| | || ||| || || Sbjct 18874 TTGATTACTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGTTC 18815 Query 72069 TCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 72128 || | | || || || || ||||||||||| | ||| || || | | || || Sbjct 18814 CCTAGCACGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATGTC 18755 Query 72129 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATC 72188 || |||||| |||||||| |||||||| | | || || | ||| || ||||| ||||| Sbjct 18754 AGCATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGATC 18695 Query 72189 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 72248 | ||| | || ||||| || |||||||| ||||| || | || |||||| || |||| Sbjct 18694 GACGTAACGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACACC 18635 Query 72249 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCC 72308 ||| || || | ||||| | || ||| | |||| | || || || || || Sbjct 18634 ATTTGTACCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGCCAATCCC 18575 Query 72309 CCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACT 72368 ||||| |||||| |||| ||| ||| |||||| |||||||| || || || ||||| Sbjct 18574 ACCTGCTGATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAATACT 18515 Query 72369 ATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 72428 |||||| ||||| | || || || ||||| ||| |||| || | || | Sbjct 18514 ATCATCTTTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCGCTGC-TG 18456 Query 72429 AAATAAG-GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA 72487 | | ||| || || || || ||||| |||||||||| |||| |||||| || | || Sbjct 18455 AGAAAAGAGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATGTGTTAA 18396 Query 72488 TAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAG 72547 ||||| || ||||| ||| || || | | || | ||| | ||| ||||| | Sbjct 18395 TAGCTCCGTCAATATCTTCACCATGAATGCCAATGGAAACCCTCATGAGCATGTGCTGCG 18336 Query 72548 GTCTTTC 72554 | ||||| Sbjct 18335 GCCTTTC 18329 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 72772 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 ||||| ||||| ||||||| ||| || | ||| | ||| || || || || ||||||||| Sbjct 16052 TTTTTGGTTTCTTTGTGTAAATTAGAAATGGCCAATCTTGCAGCAAGTATTGCATAATCT 15993 Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891 ||||| | ||||| || |||||| |||| || || | | || | ||| || ||| Sbjct 15992 GGATGATCAGTAGTCATGGTTGCTGCTGTTTCGGCAGCTAAGTTATCAAGTTCCACAGTT 15933 Query 72892 GTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTAT 72932 || ||||| ||||| || ||| || |||| || ||| Sbjct 15932 GTCACTCCCGAGTATATCCCACTGATGACTTTCAGAGTTAT 15892 >seq5451 Length=979821 Score = 89.7 bits (98), Expect = 7e-13 Identities = 245/375 (65%), Gaps = 3/375 (1%) Strand=Plus/Plus Query 165034 TTTCTGTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGG 165093 ||||| |||||||||| | || ||||| || ||| | || | || || | | || Sbjct 213638 TTTCTCTTATGACTCCTGTGCTACCAATGTTGGCTGAAGCTTGCAAATCAGTGGAAATGG 213697 Query 165094 CGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTAC 165153 | | ||||| | ||| |||||||| | ||| | ||||| || ||||||||||| | Sbjct 213698 CAATGAAAAAGTGTCCCAATGGAATGTTCTCAGAAATAAAATATGACGGTGAAAGAGTGC 213757 Query 165154 AAGTTCATaaaaaaaaTAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCT 165213 |||| || |||||| || ||||| | || ||| | |||||||| | Sbjct 213758 AAGTGCACAAAAAAGGGAATGAGTTCAAATATTTCTCAAGAGCGTTAAAACCAGTTATGG 213817 Query 165214 CTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTA 165273 | || ||||| | || |||| || || ||||| |||| || ||||| |||| | Sbjct 213818 CACACAAAGTCAGTCATTTCAAGGATTATTTACCGCAAGCTTTCCCAAAAGGTACGGACA 213877 Query 165274 TCGTATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTG 165330 | || ||||| ||||| || | | ||||| | ||| || || | || || | Sbjct 213878 TGATACTGGATGCTGAAGTTTTGATGGTAGATGTGAATACTGGGAAGCCATTGCCATTCG 213937 Query 165331 GAAGTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGT 165390 | | |||||| |||| || | ||||| ||| | | | ||||| ||| | | | Sbjct 213938 GTACATTAGGTGTACATAAGCGGTCAGAATTCAAAGATGCACAAGTGTGTCTGTACATAT 213997 Query 165391 TTGACTGTTTGCACT 165405 ||||||||||| ||| Sbjct 213998 TTGACTGTTTGTACT 214012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670411190142040