Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4228 161 1e-34 seq4509 134 2e-26 seq5144 116 5e-21 seq3468 107 3e-18 >seq4228 Length=62806 Score = 161 bits (178), Expect = 1e-34 Identities = 931/1466 (64%), Gaps = 46/1466 (3%) Strand=Plus/Plus Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGG 96883 ||| || ||||| ||| | ||| | ||||| | | || ||||| || || || Sbjct 18646 TGGTCTTGTGCCGATGTTAAGAGTTTACAACAACACAGCGCGTTACGTCGATCAAGGAGG 18705 Query 96884 CAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGA 96943 |||||| | || ||||| | ||| | || |||||||| ||||| || ||| | ||||| Sbjct 18706 TAATAAAAGACCTGGCGCATTTGCCATATATTTGGAACCATGGCATGCTGACATATTTGA 18765 Query 96944 CTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTA 97003 ||| | || || || || |||| ||||| | ||| || ||||| ||||||| Sbjct 18766 ATTTCTGGATTTGAAAAAGAATACTGGGAAAGAAGAAGTACGTGCTAGGGAACTGTTTTA 18825 Query 97004 TGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCT 97063 ||| | ||| | |||||||| || ||||| | || | | | ||||| | Sbjct 18826 TGCCTTATGGATACCAGATTTATTTATGAAAAGAGTTGAAAGTAATCAAGATTGGAGTAT 18885 Query 97064 AATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAA 97123 |||||| || | | || ||| | |||||||| ||||| ||||| ||||| || Sbjct 18886 AATGTGTCCTCATGATTGCCCTGGTTTATCCGATTGTTGGGGAGAAGAATTTGAAGCATT 18945 Query 97124 GTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGT-CGATGCACGAGAACTGT 97182 ||| | || || || || || || | || | || ||| ||| || | | ||| Sbjct 18946 GTATGAGAAATATGAACAGGAAGGTCGCTTTGTAAAACAAGTGCGA-GCTCAGGTTTTGT 19004 Query 97183 GGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATA 97242 |||| || || | || || || || || ||||| || ||||| || || || ||| Sbjct 19005 GGAAAGCTATAATTGAAGCACAAGTTGAAACAGGAACACCATACATGCTTTATAAAGATT 19064 Query 97243 CCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCA 97302 | || | || || ||||| | | |||||||| || || ||| || |||| Sbjct 19065 CATGCAACAGAAAAAGTAACCAGAAGAATCTAGGCACCATTAAATGCAGCAACCTTTGCA 19124 Query 97303 CGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCA 97362 | ||||||||||| || | || | || || || || ||| | | || || | Sbjct 19125 CTGAAATTGTAGAATATACTTCAGCAGATGAAGTTGCTGTCTGCAATTTAGCTTCAATTG 19184 Query 97363 ATCTGCCCAAGTTTGTA---GAGGGTAAAGTGTTTAATCTCAACCTATTGGCA-AAGACG 97418 | | ||||||| || | |||| | ||| | | | |||| | ||| | Sbjct 19185 CATTAAATATGTTTGTAAATGATGATAAAACATACAATTTTATCAAATTGAAAGAAGTCA 19244 Query 97419 GTGCGTCTGGTGACTAGGAATCTAAACAAGATTATCGACAATGCACTCTATCCCATTCCC 97478 | || | ||| |||||| ||||| ||||| || || ||| | |||| | || Sbjct 19245 CTAAAACTA-TAACTGAGAATCTGAACAAAATTATTGATG-TGAACTTTTACCCAGTGCC 19302 Query 97479 TC-GGCTGCCAAGTCAAACTTTAAGCACCGACCCATCGGTATAGGAGTGCAAGGCTACGC 97537 ||| || ||||| | | |||| ||||||| || || ||||| ||||| | || Sbjct 19303 AGAGGCAAAAAAATCAAATATGAGGCACAGACCCATTGGAATTGGAGTTCAAGGATTAGC 19362 Query 97538 AGACGCTCTGGCCATGATGGGTATAGCCTACGAG---GA--CT-CGATGCAGTTGAATCG 97591 || ||| | | | ||| | ||| | || || || || | || | || |||| Sbjct 19363 TGATGCTTTTGTTTTAATGCGCATACCATATGAAAGCGAAGCTGCTATAAAATTAAATCA 19422 Query 97592 TGACATTTTCGAAACCATCTACCATGCAGCACTGACGGAGAGTTGCCAACTGGCCAGAGT 97651 | || || ||||| |||||| ||| |||||| || || || || | ||| ||| Sbjct 19423 ACAAATATTTGAAACAATCTACTATGGTGCACTGGAGGCTAGCTGTGAATTAGCC-GAGA 19481 Query 97652 -GCACGGAGTCTACGAATCGTACCACGGTAGCCCGACCAGTCGTGGAGAGTTGCACTTCG 97710 ||| ||||| || || | || | || ||||| | || | || ||||| | | Sbjct 19482 AGCATGGAGTATATGAGACTTATGAAGGCAGCCCTGCAAGCCAAGGTATATTGCAGTATG 19541 Query 97711 ACCGATACTCGGTGCACAG---CCAAAAG-----TGTGACTGGTCATCGTTGCGCAAAGA 97762 || | || || || |||| || || |||||| || | ||||| Sbjct 19542 ACATGT----GGAACA-AGACCCCAACAGATTTGTGGGACTGGGATTCACTA---AAAGA 19593 Query 97763 CA---TTGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTAC 97819 | |||| | ||| | ||||| || | || | ||||| ||||| || ||| | Sbjct 19594 GAAGATTGCAAAACATGGTCTTAGAAATTCACTATTGCTAGCACCTATGCCAACTGCTTC 19653 Query 97820 CACTTCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCA 97879 ||| | || | || || ||| |||||| |||||||| || || |||||||| ||||| Sbjct 19654 CACAGCACAGATATTGGGAAATAATGAATCATTTGAACCTTTTACATCAAACATATACCA 19713 Query 97880 GAGACGCACCCAGTCTGGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTG-- 97937 ||||| | ||| || ||||| ||| || || |||||| | | || || Sbjct 19714 AAGACGTGTCTTGTCGGGTGAGTTCCAAGTGGTGAATCATCACTTGTTACATGATTTAAC 19773 Query 97938 -GAACGGCTCAATCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTC 97996 ||| ||| | | | ||| |||| || ||| | | || || |||| ||||| || Sbjct 19774 TGAA--GCTGATT-TATGGGACGAAGATATGAAAAATCTTATAATCCACAATAATGGATC 19830 Query 97997 CATTCAAAACATTACCATC-ATCCCGGAAGAGTTGCGCAGAATC-TACAAGACTGTCTGG 98054 ||||||| |||| ||| || || |||| | | ||| | || || ||||||||| Sbjct 19831 TATTCAAAGCATTGA-ATCTATTCCTAAAGAAATAAG-AGACTTGTATAAAACTGTCTGG 19888 Query 98055 GAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAG 98114 || ||| | || || || | ||||||||||||||||||| | || || || Sbjct 19889 GAAATTTCTGTAAAAACTACAATACAAATGGCTGCCGACAGAGGTGCATTTATCGATCAA 19948 Query 98115 AGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATACAC 98174 || || || || ||| | | ||||| || || | |||| || || | || || || Sbjct 19949 AGCCAGTCCTTTAATATCCATGTTGCTGAACCAAACTACGGTAAATTGTCATCTATTCAT 20008 Query 98175 TTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCC 98234 || || |||||||| | ||| | || || || |||||||| || | ||||| | || Sbjct 20009 TTCTATGCATGGAAAATGGGTTTGAAAACAGGAATGTACTACCTTCGCACAAAACCTGCT 20068 Query 98235 ACCAATGCCATACCATTTACGGTGGA 98260 |||||||||| |||||| || || Sbjct 20069 GTGAATGCCATACAATTTACTGTTGA 20094 >seq4509 Length=99351 Score = 134 bits (148), Expect = 2e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 126746 TACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTTGTCTCCGGGTACTGTGTTTTTGT 126805 |||| || | || ||||| || ||| ||||||||||||||||| || ||||| |||| Sbjct 73450 TACCCAGCCGAATACCGCTAGGGTGGAGCGCGCTCTTGTCTCCGGGCACGGTGTTCTTGT 73391 Query 126806 TGCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGCCGGTGCTCCTGCGAGTCCCACAC 126865 ||||||| || ||||| || || ||||| || || ||||| || || | || || ||| Sbjct 73390 TGCAAGCAATACTGCAGAGCTCCAGGATACGTTCAGCCGGGGCGCCAGTCAGGCCAGCAC 73331 Query 126866 TGCGCAAATCCACTAGAATCAGATGCACATCGGTACCGCCAGTGGTGACGGTGTAGCCTC 126925 |||||| || || |||||||| ||||| ||||||||||| || | || |||||| | Sbjct 73330 TGCGCATGTCTACCAGAATCAGGTGCACCTCGGTACCGCCGGTCGCGATTTCGTAGCCAC 73271 Query 126926 GTGA 126929 | || Sbjct 73270 GAGA 73267 >seq5144 Length=350770 Score = 116 bits (128), Expect = 5e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 50760 TGATTGTAATGCTGGGCGCCGTGGCTCACATCTGTGGACACTTGGTGTACGCTCACGCAA 50819 ||||||| |||||||| ||| || || || || || |||||||||||||| || || | Sbjct 65131 TGATTGTGATGCTGGGAGCCACAGCCCATATTTGCGGGCACTTGGTGTACGCCCATGCGA 65190 Query 50820 AGATTGCCAACCTATGGTACCTGGGAGCGACGCTGGCCGCACTGGGACCTTGTGTGGCTC 50879 ||| | ||||| ||||| |||| || ||| || || || || || ||||| || | Sbjct 65191 AGACAGGGAACCTGTGGTATGTGGGCGCCACGGCTGCGGCCCTCGGGCCGTGTGTAGCGC 65250 Query 50880 CGCTCTTGCGATCGATGGCCTCAAAGGTGCTGCCTGCTTCGGAGCGAGG 50928 | || | || || ||| | || ||||||||||||||||| |||||||| Sbjct 65251 CTCTTATACGCTCCATGACTTCCAAGGTGCTGCCTGCTTCCGAGCGAGG 65299 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 49796 ACCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCGAG 49855 || ||||| || || ||||| || || |||||||| | ||||| ||||| ||||| || Sbjct 52454 ACAGTGGAACCGCCAATGTTCCTGTATATGATGGCATACATGATCACCACTGTCATAGAA 52513 Query 49856 CAGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGTGC 49915 || | || || |||| |||||| ||||| || |||||||||||| || ||| | ||| Sbjct 52514 CAAACATTCTATGTGTTCCAAGCTTGCACAGTGAACCATGGCTACAGCCCGGAGATATGC 52573 Query 49916 CACAACATTAGC 49927 |||| || ||| Sbjct 52574 TACAATATAAGC 52585 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/278 (68%), Gaps = 8/278 (3%) Strand=Plus/Plus Query 50341 CCGATCCTACCCCATCATGTTTGCAATCAATACGAGTCTAATGATTGCGGCCACATTGTA 50400 |||||||| | ||||||| || ||||| ||| || ||| | || |||||||| Sbjct 63869 CCGATCCTTTACGGTCATGTTCGCTATCAACACGTCCCTCATGGTGCTAGCTACATTGTA 63928 Query 50401 CACGATCCTATTCCTAAAATGGCAAACTCGACCAGAGCAAAAATCCCTCAAAGAGACTGG 50460 || | |||||||||||||||| || | || ||||| || || | ||||| | || Sbjct 63929 TACTGTGATATTCCTAAAATGGCAGACAAGGCCCGAGCAGAAGTCTATGAAAGAAGCAGG 63988 Query 50461 CCTCAAGAATGCACTCGGAGACTTTTTCGATTTGGAAAACAT----CAACACTACCCTGA 50516 ||||||| | | ||||| || ||| || | || || ||| |||| | | Sbjct 63989 GGTCAAGAACCCCGTGAAGGACTTCTTTGATGTGAAGAATATAGCGCAA-ACTATCACG- 64046 Query 50517 ATATTCTAGTGAAAAAGAGGCCCAACAATCGGCGACTCTTTTTGTGGTTCATTTTGCTGT 50576 |||| | | | |||||||| ||||||||| | || ||| |||||||| || | | | Sbjct 64047 ATAT--TGACGCAGAAGAGGCCGAACAATCGGAGGCTATTTCTGTGGTTCCTTCTTATAT 64104 Query 50577 CGATGGCCTTTTATACGTTTCATCGAGACGAGCGCTCT 50614 ||||||| ||||| || || || ||| ||| |||| Sbjct 64105 CGATGGCTTTTTACACTTTCCAGAGAGGTGAGTACTCT 64142 >seq3468 Length=28886 Score = 107 bits (118), Expect = 3e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 70195 TCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGC 70254 |||| ||||||| || || | ||||| ||||||| || ||||| || ||||||| Sbjct 2104 TCCAGCAGATAGAAGAATGTTGATGTGTGCATGGAACCCATCAGATCTGAGTAAAATGGC 2045 Query 70255 ACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA--TGGCAAATTGTCATGC 70312 |||| || || || || | || |||||| | ||| | ||| ||| | || ||| Sbjct 2044 TTTACCCCCATGCCATTGCCTTGCCCAGTTTCAT--GTATCAAGTGGTAAACTTTCCTGC 1987 Query 70313 TTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTAT 70372 | | || || |||||||| || |||||||| || || || ||||| ||||| |||||| Sbjct 1986 CTTCTCTACCAAAGGAGTGCAGATATGGGCCTGGGAGTTCCGTTTAATATTGCCAGCTAT 1927 Query 70373 TCTATGTTGACGCACATGATTGCTCACATTACCGG 70407 ||| | | || ||||||||||| || || || || Sbjct 1926 TCTTTCCTCACACACATGATTGCACATATCACAGG 1892 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 70421 GAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAG 70480 || || || ||||| | || || | || ||||| | || ||||| || ||||| || Sbjct 1790 GAATTTGTCCACACTACAGGAGATACCCATGTGTACCTTAACCACATAGAACCATTGAAA 1731 Query 70481 GTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAA 70540 |||||||| || | || | || || || | | |||||||||||||||| ||||| Sbjct 1730 GTGCAACTACAAAGAATACCAACTCCCTTCCCAACGTTGGAGTTTGCTCGTAAGGTTGAC 1671 Query 70541 AATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAG 70600 ||| || ||| ||||| ||||| ||||| || |||||||| | || | ||||| Sbjct 1670 TCTATCGATGATTTCAAGTATGAAGACTTTATCATCAAAGGTTATAAACCTCATCCTAAA 1611 Query 70601 ATTCCCATGGTTCTGGCTGTTTAG 70624 ||| |||| ||||||||||| Sbjct 1610 ATTGATATGGAAATGGCTGTTTAG 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740255345296040