Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1544 95.1 8e-15 >seq1544 Length=14195 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| ||||| || | ||| || || || || || ||||| ||||||| || | | Sbjct 5096 CGCAGTACCAAGTGGAGTGTAGATTCCTTCTGGATGTTGTAGTCAGACAGTGTGCGGCCG 5155 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | ||||||||| || || | || ||||| || | || ||||||||||| Sbjct 5156 TCTTCTAGCTGCTTTCCAGCGAAGATCAGTCGCTGCTGATCTGGTGGAATGCCTTCTTTG 5215 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || ||| |||||| ||| ||| ||||| ||| | ||| || ||||| || Sbjct 5216 TCTTGAATTTTAGCTTTTACATTTTCAATAGTGTCTGAGGGCTCAACTTCAAGAGTGATA 5275 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| ||||| | ||||| |||||||| ||||| Sbjct 5276 GTTTTACCCGTCAAGGTTTTCACGAAAATCTGCAT 5310 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| || | || || || ||||| ||||| || ||||| | || || Sbjct 4412 CGCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATATTATAGTCAGAGAGGGTGCGTCCA 4471 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||| || || || | ||| |||||||| | ||| |||||||| || Sbjct 4472 TCTTCCAATTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTG 4531 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || | | ||| |||||| |||| || || || || Sbjct 4532 TCTTGAATCTTGGCC---TTGACATTCTCAATAGTGTCGGAAGGTTCGACCTCAAGGGTG 4588 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || | || || |||||||| ||||| Sbjct 4589 ATGGTCTTACCAGTCAAGGTCTTGACGAAAATCTGCAT 4626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318440454733542