Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq4167 87.8 1e-12 >seq4167 Length=57674 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 || || || ||||| || ||| || | || || |||| |||| ||| ||||| || || Sbjct 17819 TCCTTCTGGATATTGTAGTCGGATAGAGTG-CGTCCATCTTCCAGTTGCTTTCCGGCGAA 17877 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||| | |||||||| |||| | ||||| || ||| ||| || ||| || | Sbjct 17878 GATCAATCTCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTTAACATT 17937 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | ||||| | || ||||| || | || |||||||| || || ||||||||||| Sbjct 17938 TTCGATGGTATCAGAGGGTTCCACCTCCAAAGTGATTGTTTTCCCCGTCAAAGTCTTCAC 17997 Query 44110 AAATATTTGCATGTCGA 44126 || || ||||||| || Sbjct 17998 GAAGATCTGCATGTTGA 18014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354402380447292