Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq5356 120 2e-22 seq5223 118 6e-22 seq3458 116 2e-21 seq81272 114 7e-21 seq74916 114 7e-21 seq38851 114 7e-21 seq30304 114 7e-21 seq5205 114 7e-21 seq2969 113 2e-20 seq77942 95.1 6e-15 seq73895 93.3 2e-14 seq2354 86.0 3e-12 seq57455 84.2 1e-11 seq14401 84.2 1e-11 >seq5356 Length=595811 Score = 120 bits (132), Expect = 2e-22 Identities = 82/92 (89%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| |||||| || | |||||||||| |||||||||| ||||||||||||||||||| Sbjct 332635 TAACAAAAAAATAATTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 332576 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||| ||||||||||||||||||||| Sbjct 332575 ACGACGCTCTAACCAACTGAGCTAATGGGCCG 332544 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||| | ||||||||||||||||||||||||||||| |||||| Sbjct 353381 TGGCCCATGAGGGGATCGAAACCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 353322 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 353321 TGAGCTAATGGGCCG 353307 >seq5223 Length=423181 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11445 AAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| |||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 128213 AAAAAAGAAATGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 128154 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 128153 GCTCTAACCAACTGAGCTAATGGGCC 128128 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 121258 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 121317 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 121318 TGAGCTAATGGGCCG 121332 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 121577 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 121636 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 121637 TGAGCTAATGGGCCG 121651 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 130183 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 130242 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 130243 TGAGCTAATGGGCCG 130257 Score = 86.0 bits (94), Expect = 3e-12 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 11462 ATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA---CGCTCTRACCAACTGA 11518 |||| |||||||||| ||||||||||||| |||||| || |||||| ||||||||| Sbjct 123922 ATGAGGGGATCGAACCCGCGACCTTCGCGTTCTTAGCATGATGACGCTCTAACCAACTGA 123981 Query 11519 GCTAATGGGCCG 11530 |||||||||||| Sbjct 123982 GCTAATGGGCCG 123993 Score = 82.4 bits (90), Expect = 4e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||| | |||||||||| |||| ||||||||||||||||||| ||| |||||| Sbjct 191839 TGGCCCATAAGGGGATCGAACCCGCGACATTCGCGTTATTAGCACGACAGTCTTACCAAC 191780 Query 11516 TGAGCTAA 11523 |||||||| Sbjct 191779 TGAGCTAA 191772 >seq3458 Length=28711 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 5624 AAAAAGAAACGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 5565 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 5564 CTCTAACCAACTGAGCTAATGGGCCG 5539 >seq81272 Length=4092 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 3726 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 3785 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 3786 TGAGCTAATGGGCCG 3800 >seq74916 Length=2047 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1038 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 979 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 978 TGAGCTAATGGGCCG 964 >seq38851 Length=779 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 466 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 525 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 526 TGAGCTAATGGGCCG 540 >seq30304 Length=681 Score = 114 bits (126), Expect = 7e-21 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 182 AAAAAGAAACGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 241 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 242 CTCTAACCAACTGAGCTAATGGGCC 266 >seq5205 Length=402196 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 200400 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 200341 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 200340 TGAGCTAATGGGCCG 200326 >seq2969 Length=22195 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 13190 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 13249 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 13250 TGAGCTAATGGGCC 13263 >seq77942 Length=2597 Score = 95.1 bits (104), Expect = 6e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2597 CGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 2539 >seq73895 Length=1923 Score = 93.3 bits (102), Expect = 2e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11473 GAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1923 GAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 1866 >seq2354 Length=17736 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| ||||| |||| ||||||||||||||| |||| |||||||| ||||| Sbjct 5575 TTGGCCCATGGGGGGATCAAACCCTCGACCTTCGCGTTAGAAGCATGACGCTCTAACCAA 5634 Query 11515 CTGAGCTAATGGGCCG 11530 |||||| ||| |||| Sbjct 5635 CTGAGCCAATTCGCCG 5650 >seq57455 Length=1114 Score = 84.2 bits (92), Expect = 1e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 58 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1 >seq14401 Length=551 Score = 84.2 bits (92), Expect = 1e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 494 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 551 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261214641922204