Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq3522 84.2 2e-12 >seq3522 Length=29972 Score = 84.2 bits (92), Expect = 2e-12 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 5206 TGAACAAACACTCAGTGCA-TTTCTGTTAAAGACTTGTGGTAATAATCGTCGAGCTAATG 5264 |||||| ||||| ||| |||| || || || || || | ||| | ||| |||| Sbjct 4006 TGAACATGTACTCAAAGCAATTTCAGTGAA-GATTTCTGTAAGTAAATTTGCAGCGAATG 4064 Query 5265 ATTTGCAATCTTTCGATACTTGCTGACAGTATTTGAGGTCTCC-GCAGCTGACGTAAACA 5323 ||||||||| ||||| ||| |||||| | ||| | | | ||| | || || ||| Sbjct 4065 TTTTGCAATCATTCGACTCTTTCTGACATTCAGCGAGTTTTTCAGCAT-TAACATACACA 4123 Query 5324 CCACTTTGGGGCATAAGTTCTACGAGTCCCGG--CAGATTTGATCGATACTTTAATGTCC 5381 || || ||| |||||||| |||||||| ||| | |||||||||||||||| Sbjct 4124 CCGGAATGTTCCATTAGTTCTACAAGTCCCGGAGCAGGCTCA--CGATACTTTAATGTCC 4181 Query 5382 ATCTTGTATCATAAGCATCATATTCCGGTGGTAGA 5416 |||||| |||| || |||||||| ||||| ||| Sbjct 4182 ATCTTGAGTCATTTGCGTCATATTCTGGTGGGAGA 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50899277276194