Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006644.1 Length=16103 Score E Sequences producing significant alignments: (Bits) Value seq64171 183 3e-42 seq5460 141 1e-29 seq5475 93.3 4e-15 seq28486 89.7 5e-14 seq5399 87.8 2e-13 seq4731 86.0 6e-13 seq4463 86.0 6e-13 seq80849 84.2 2e-12 seq3132 84.2 2e-12 seq84552 80.6 3e-11 seq69233 80.6 3e-11 seq5205 80.6 3e-11 seq60884 78.8 1e-10 seq5453 78.8 1e-10 seq60 78.8 1e-10 >seq64171 Length=1326 Score = 183 bits (202), Expect = 3e-42 Identities = 289/409 (71%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 4650 ATGTTTGCCTCTCATTTCTTGCATTTTGTTACGAATAGTGTTCAAAATCAGCTGCGAA-T 4708 || |||| ||| ||||||||||||||||| || ||| |||| ||||| || || | Sbjct 553 ATATTTGGATCTAATTTCTTGCATTTTGTTCCGTATACTGTTTAAAAT-AGTCGCATTGT 611 Query 4709 CAAATTCAACCCATTT-TTGCCCAGTCGCATGTTTTTTAACATAGTTCAATAAAACAGTT 4767 | || | |||| || ||| | | || || | || ||| || |||||||||| ||| Sbjct 612 CTCTTTTAGCCCACTTATTGGCTTGG-GCGTGCTGTTCAACGTAAGTCAATAAAACCGTT 670 Query 4768 CTTGCATGTTCATCTAGACCGGGCCTTACACTTGTTCCCTCCAAGTCAAATGCATTGGCt 4827 ||||||| |||||| | ||| ||||||||| ||| || || || |||||||| || ||| Sbjct 671 CTTGCATTTTCATCCAAACCAGGCCTTACATGTGTCCCGTCGAAATCAAATGCCTTAGCT 730 Query 4828 ttttttCCAGTTAGAGAACATATACTTAATGCGTTCTCGGTAAAAATTTCCAGTAACAAC 4887 || ||||||| |||||| || || || |||| ||||||||||| | ||||| Sbjct 731 CTTACGCCAGTTAAGGAACATGTAAACAACGCACTCTCTGTAAAAATTTCTACCAACAAT 790 Query 4888 GATCGTGCAAGAGTTTTGCTGTCTTTCGACATTATTTTAATATTACTTAGTTGAATGGCG 4947 ||||||| || |||||| | ||| | | | ||||| ||| | |||| ||| || Sbjct 791 AATCGTGCTAGTGTTTTGGAATTTTTTGCTAATCTTTTACAATTGATGAGTTTAATAGCA 850 Query 4948 TCTATGTACACCCGTGAATGTGGTAGAAGTTCAACGAGACCACTTTTCTTTTCCCGATGC 5007 | || ||||| | | |||| || ||||||||| || || | | ||| |||| Sbjct 851 TTTACATACACGCCCGTATGTTCTATAAGTTCAACAAGTCCTGGTGCGTATTCACGATAT 910 Query 5008 TTTAGGGTCCATCTTGAGTCATTCGGATCGTATTCTGGTGGAAAAATAA 5056 | | |||||| |||||||||| || ||||| || || ||||||| Sbjct 911 CTCAAAGTCCATTTTGAGTCATTTTTATTATATTCAGGCGGTAAAATAA 959 >seq5460 Length=1034484 Score = 141 bits (156), Expect = 1e-29 Identities = 231/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 4743 TTTAACATAGTTCAATAAAACAGTTCTTGCATGTTCATCTAGACCGGGCCTTACACTTGT 4802 || |||| | ||| || || |||||||||| |||||||| || |||||||| || Sbjct 430495 TTCAACAAATGTCAGTAGTACTGTTCTTGCATTTTCATCTAATCCTGGCCTTACGGCTGC 430554 Query 4803 TCCCTCCAAGTCAAATGCATTGGCtttttttCCAGTTAGAGAACATATACTTAATGCGTT 4862 || || | || | || | ||| || || |||| ||||||||||||||||| | Sbjct 430555 CCCTTCGACATCGTAAGCTCTAGCTCTTAACCCTGTTAATGAACATATACTTAATGCACT 430614 Query 4863 CTCGGTAAAAATTTCCAGTAACAACGATCGTGCAAGAGTTTTGCTGTCTTTCGACATTAT 4922 || ||||||||||| || || ||| ||| || | | |||| |||||||||| | | Sbjct 430615 CTGAGTAAAAATTTCAAGCAATAACATTCGAGCCAATGAATTGCAATCTTTCGACAATCT 430674 Query 4923 TTTAATATTACTTAGTTGAATGGCGTCTATGTACACCCGTGAATGTGGTAGAAGTTCAAC 4982 || |||||| |||| | ||| | || ||||| | ||| || | ||||| || Sbjct 430675 CTTGCAATTACTAAGTTTTACGGCATTAATATACACGTTGGTATGAGGCATGAGTTCTAC 430734 Query 4983 GAGACCACTTTTCTTTTCCCGATGCTTTAGGGTCCATCTTGAGTCATTCGGATCGTATTC 5042 || || | |||| |||| ||||| |||||||||||||| || ||||||||| Sbjct 430735 AAGTCCTGGCGCCATTTCACGATACTTTAAAGTCCATCTTGAGTCGTTTTCATCGTATTC 430794 Query 5043 TGGTGGAAAAATAAATTTGCGTGCTTGACCACG 5075 | || |||| ||||||||| |||| ||| Sbjct 430795 CAGAGGTAAAACGAATTTGCGTTTATGACAACG 430827 >seq5475 Length=1183411 Score = 93.3 bits (102), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 7274 TTTATTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAA 7333 ||| ||||||||||||||||||||||| ||| ||||||| | || |||||||| || || Sbjct 100247 TTTTTTTTTGACGTGATAACGTCTTATAAATCGATGAACGC-CGCTGCACGCACGAAAAA 100305 Query 7334 GTGTCCCGTTCCATCTGAGCC 7354 ||||| |||||| |||||||| Sbjct 100306 GTGTCACGTTCCGTCTGAGCC 100326 >seq28486 Length=664 Score = 89.7 bits (98), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 7269 TTTTATTTATTTT-TGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCAC 7327 ||||||||||||| |||||||| |||||||||| ||| ||||||| | || |||||||| Sbjct 166 TTTTATTTATTTTTTGACGTGACAACGTCTTATAAATCGATGAACGCCGGCTGCACGCAC 225 Query 7328 AAATAAGTGTCCCGTT 7343 ||| || ||||||||| Sbjct 226 AAAAAAATGTCCCGTT 241 >seq5399 Length=703526 Score = 87.8 bits (96), Expect = 2e-13 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 7278 TTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTGT 7337 ||||||||||||||||||||||| ||| ||||||| | || |||||||| | |||||| Sbjct 52723 TTTTTGACGTGATAACGTCTTATAAATCGATGAACGCCGGCTGCACGCACGA--AAGTGT 52780 Query 7338 CCCGTTCCATCTGAGCC 7354 | ||||||| ||||||| Sbjct 52781 CACGTTCCACCTGAGCC 52797 >seq4731 Length=146420 Score = 86.0 bits (94), Expect = 6e-13 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 7271 TTATTTATTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAA 7330 || ||| ||||||||||||||| ||||||| ||| ||||||| || |||||||| || Sbjct 44272 TTTTTTTTTTTTGACGTGATAATGTCTTATAAATCGATGAACGTCGGCTGCACGCACGAA 44213 Query 7331 TAAGTGTCCCGTTCCATCTGAGCCAAA 7357 ||||||| |||||| ||||||| || Sbjct 44212 AAAGTGTCACGTTCCGCCTGAGCCGAA 44186 >seq4463 Length=92672 Score = 86.0 bits (94), Expect = 6e-13 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 7278 TTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTGT 7337 ||||||||||||||||||||||| ||| |||||| | || |||||||| || |||||| Sbjct 66272 TTTTTGACGTGATAACGTCTTATAAATCGATGAATGCCGGCTGCACGCACGAAAAAGTGT 66213 Query 7338 CCCGTTCCATCTGAGCC 7354 | |||||| ||||||| Sbjct 66212 CACGTTCCGCCTGAGCC 66196 >seq80849 Length=3862 Score = 84.2 bits (92), Expect = 2e-12 Identities = 74/93 (80%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 7268 GTTTTATTTA------TTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGC 7321 |||||||||| || |||||||||||||||||||| ||| ||||||| | | || Sbjct 400 GTTTTATTTAACATACTTATTGACGTGATAACGTCTTATAAATCGATGAACGCCGACTGC 341 Query 7322 ACGCACAAATAAGTGTCCCGTTCCATCTGAGCC 7354 |||||| || ||||||| |||||| ||||||| Sbjct 340 ACGCACGAAAAAGTGTCACGTTCCGCCTGAGCC 308 >seq3132 Length=23988 Score = 84.2 bits (92), Expect = 2e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 7279 TTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTGTC 7338 |||||||| ||||||||||||| ||| ||||||| | || |||||||| || ||||||| Sbjct 21514 TTTTGACGGGATAACGTCTTATAAATCGATGAACGCCGGCTGCACGCACGAAAAAGTGTC 21455 Query 7339 CCGTTCCATCTGAGCC 7354 |||||| ||||||| Sbjct 21454 ACGTTCCGCCTGAGCC 21439 >seq84552 Length=6604 Score = 80.6 bits (88), Expect = 3e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 7277 ATTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTG 7336 ||||||| |||||||||||||||| ||| ||||||| | || |||||||| || ||||| Sbjct 6531 ATTTTTGCCGTGATAACGTCTTATAAATCGATGAACGCCGGCTGCACGCACGAAAAAGTG 6590 Query 7337 TCCCGTTCC 7345 || |||||| Sbjct 6591 TCACGTTCC 6599 >seq69233 Length=1557 Score = 80.6 bits (88), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 7279 TTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTGTC 7338 |||||||||||| ||||||||| ||| ||| ||| | || ||||||||||| ||||||| Sbjct 1078 TTTTGACGTGATGACGTCTTATAAATCGATAAACGCCGGCTGCACGCACAAA-AAGTGTC 1020 Query 7339 CCGTTCCATCTGAGCC 7354 |||||| ||||||| Sbjct 1019 GCGTTCCGCCTGAGCC 1004 >seq5205 Length=402196 Score = 80.6 bits (88), Expect = 3e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 7278 TTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAGTGT 7337 ||||||||||||||||||||||| ||| ||||||| | | | |||||| || |||||| Sbjct 360017 TTTTTGACGTGATAACGTCTTATAAATCGATGAACGCCGACTGAACGCACGAAAAAGTGT 359958 Query 7338 CCCGTTCCATCTGAGCC 7354 | |||||| ||||||| Sbjct 359957 CACGTTCCGCCTGAGCC 359941 >seq60884 Length=1213 Score = 78.8 bits (86), Expect = 1e-10 Identities = 134/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6294 TTCAACACGTTTCTTTATTTCTGATAGTTCTTCAACGGGAAATTTGACAAGAGCTGGACC 6353 || ||||||||| ||| || ||||| | ||| ||||||||||| ||| || Sbjct 11 TTTAACACGTTTATTTGTTATTGATAAATTTTCTACGGGAAATTTAGCAACGACTACTTG 70 Query 6354 ATCTGATGTTTCACGTAACCTTATCCAAGAATTCGGAATGCAAACATATTTTTCTGGATC 6413 ||| | ||||||||||| |||||||||| ||| |||||||| |||| || || Sbjct 71 ATCCACTATTTCACGTAACTGAATCCAAGAATCCGGTATGCAAACGTATTGATCGATGTC 130 Query 6414 TATGTATGGAGGTTCCAATAATTCAATCACATGA-AACTTAAACTCTTTCTGTTTGCTCA 6472 ||||||| || ||||| ||| || |||| | | | || |||| || | | ||| Sbjct 131 ACTGTATGGCGGATCCAAAAATGTAACAACATAATATCGATAATTCTTCCT-TATATTCA 189 Query 6473 TCTGAAAATAAA 6484 || |||||||| Sbjct 190 TCCTAAAATAAA 201 >seq5453 Length=983799 Score = 78.8 bits (86), Expect = 1e-10 Identities = 65/78 (83%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 7278 TTTTTGACGTGATAACGTCTTATGAATTGATGAAC-ACTAGCAGCACGCACAAATAAGTG 7336 ||||||||||||||||||||||| ||| ||||||| || || |||||||| || ||||| Sbjct 583797 TTTTTGACGTGATAACGTCTTATAAATCGATGAACGACGGGCTGCACGCACGAAAAAGTG 583738 Query 7337 TCCCGTTCCATCTGAGCC 7354 || ||| | ||||||| Sbjct 583737 TCACGTCCTGGCTGAGCC 583720 >seq60 Length=10119 Score = 78.8 bits (86), Expect = 1e-10 Identities = 62/74 (84%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 7275 TTATTTTTGACGTGATAACGTCTTATGAATTGATGAACACTAGCAGCACGCACAAATAAG 7334 || |||||||||||||||||| |||| ||| ||||||||| || |||||||| || ||| Sbjct 4555 TTGTTTTTGACGTGATAACGTTTTATAAATCGATGAACACCGGCTGCACGCACGAAAAAG 4496 Query 7335 TGTC---CCGTTCC 7345 |||| ||||||| Sbjct 4495 TGTCACACCGTTCC 4482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51359614917682