Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq5449 150 2e-32 seq43520 82.4 1e-11 >seq5449 Length=953902 Score = 150 bits (166), Expect = 2e-32 Identities = 163/211 (77%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 9025 AAAAACTCTAAGTGTTTAATACTAGAATAGAGAATATTTGAACAATATAATCAAAGAATA 9084 ||||||||||||||||| | || || ||| ||| |||| |||||| |||||| |||| Sbjct 730817 AAAAACTCTAAGTGTTTCAGTTTAAAACAGATAAT-TTTGT-CAATATTATCAAAAAATA 730760 Query 9085 TAAAAGTGAGTAAAATACATTAGATGACAAACTCATTTGTCTGTTAGATTCGGTGTGCTT 9144 | || ||||||||||| ||||| |||||||||| |||||| ||||| | || ||||||| Sbjct 730759 TGCAAATGAGTAAAATATATTAGGTGACAAACTCGTTTGTCCGTTAGGTCCGTTGTGCTT 730700 Query 9145 CTCTGCATATGCTTCACTCTTCTTATTATATAGCGTCGTCCTTTCT-ATAGTTGAGCTTG 9203 ||||| |||||||| ||| ||| || | | | || || ||||| || | ||| || | Sbjct 730699 CTCTGTGTATGCTTCCATCTCCTTTTTGTCTTGTGTGTTCTTTTCTGATTG-TGAACTCG 730641 Query 9204 AATCAGAATCGTGATTAGTAAATGGTGAATT 9234 | ||||| ||| |||||||| |||||| Sbjct 730640 GGTAAGAATTATGAATAGTAAATAATGAATT 730610 >seq43520 Length=843 Score = 82.4 bits (90), Expect = 1e-11 Identities = 99/135 (73%), Gaps = 6/135 (4%) Strand=Plus/Minus Query 16391 CCGAGACATAATTCTCGACTTAATGTGGTCATGCATGCGACCAAATCAGCAGATTCTTGG 16450 |||| |||||||| ||| ||| | ||| |||||| ||| ||||||||||| Sbjct 820 CCGACACATAATTTATGACCTAACATCTTCACACATGCG------TCATCAGATTCTTGG 767 Query 16451 TTTTCAGATGGTCCAGAATTATTCTGATCAGAGCTGAGGTCATCCGATAACTGAGAGGGT 16510 | |||||| ||||||||| | || | |||||| ||||||| ||||||| || |||| Sbjct 766 CCTGCAGATGATCCAGAATTGTCATGTTGAGAGCTAAGGTCATGTGATAACTTAGCGGGT 707 Query 16511 GGAATATAAAAATTG 16525 || | |||| | ||| Sbjct 706 GGCAGATAAGAGTTG 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63242080288591