Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq68734 91.5 3e-14 seq37696 80.6 5e-11 >seq68734 Length=1531 Score = 91.5 bits (100), Expect = 3e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 6165 TATAACTCCAGCCTCCCTAAGCTCTTCAATAATTGACATGATTTCATTCGTGTGACTTGG 6224 |||||| |||| || | | |||||| |||||||| || |||||||| |||| | | Sbjct 1082 TATAACATCAGCTTCTTTTAACTCTTCTATAATTGATATAATTTCATTATCGTGATTGGT 1023 Query 6225 GTTTCCAGCAGCTTGAGATGCCATCAGTAGTCGCAAACGATCAACTAGCTCATTTGGATC 6284 || |||||| || || || || || ||| ||| | |||| ||| ||||| || || Sbjct 1022 ATTACCAGCATTTTTTGAGGCAATTAGAAGTTTCAACCTTTCAATTAGTTCATTAGGGTC 963 Query 6285 ATCCCAGTAAACATAATC 6302 |||||||||||||||||| Sbjct 962 ATCCCAGTAAACATAATC 945 >seq37696 Length=765 Score = 80.6 bits (88), Expect = 5e-11 Identities = 142/203 (70%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 4342 GGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGAT 4401 |||| ||| | ||||||||||| | |||||||| |||||||| | || | ||| Sbjct 664 GGCTTCATTTTAGAAGTAGATCTCGAATATCCTGAATCAGTACATGATTTTCATAGTGAT 605 Query 4402 CTACCTTTATGC-CCAGAACATTTTGTACCACCTGGTAGCAAGCAACAAAAACTCACGAC 4460 | ||||| ||| ||||| | || |||| ||||| | ||| | ||||||| | Sbjct 604 TTGCCTTT-TGCTCCAGAGAAATTCATACCCCCTGGAGGAAAGACAGCTAAACTCATCGC 546 Query 4461 AACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGA 4520 | | | || |||||| ||| ||||| ||||| |||| | || || ||||||||| | Sbjct 545 TAATTTATATGATAAATTTAACTATGTAATTCATTATATTCACTTAAAGCAATGTTTAAA 486 Query 4521 TTTAGGTTTAGTTCTTAAGAAAA 4543 | || |||||| |||||||| Sbjct 485 ATCCGGGCTAGTTC-TAAGAAAA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97873437319566