Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006660.1 Length=20197 Score E Sequences producing significant alignments: (Bits) Value seq3522 84.2 3e-12 >seq3522 Length=29972 Score = 84.2 bits (92), Expect = 3e-12 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 4246 TCTACCACCGGAATATGATGCTTATGATACAAGATGGACATTAAAGTATCGATCAAATCT 4305 ||| ||||| |||||||| || |||| |||||||||||||||||||||| | || Sbjct 4216 TCTCCCACCAGAATATGACGCAAATGACTCAAGATGGACATTAAAGTATCG--TGAGCCT 4159 Query 4306 G--CCGGGACTCGTAGAACTTATGCCCCAAAGTGGTGTTTACGTCAGCTGC-GGAGACCT 4362 | |||||||| |||||||| ||| || ||||| || || | ||| | | | || Sbjct 4158 GCTCCGGGACTTGTAGAACTAATGGAACATTCCGGTGTGTATGTTA-ATGCTGAAAAACT 4100 Query 4363 CAAATACTGTCAGCAAGTATCGAAAGATTGCAAATCATTAGCTCGACGATTATTACCACA 4422 | | |||||| ||| ||||| ||||||||| |||| ||| | ||| | || | Sbjct 4099 CGCTGAATGTCAGAAAGAGTCGAATGATTGCAAAACATTCGCTGCAAATTTACTTACAGA 4040 Query 4423 AGTCTTTAACAGAAA-TGCACTGAGTGTTTGTTCA 4456 | || || || |||| ||| ||||| |||||| Sbjct 4039 AATC-TTCACTGAAATTGCTTTGAGTACATGTTCA 4006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 64447269808320