Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4228 515 5e-141 seq5451 84.2 3e-11 >seq4228 Length=62806 Score = 515 bits (570), Expect = 5e-141 Identities = 1181/1757 (67%), Gaps = 42/1757 (2%) Strand=Plus/Minus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075 || ||||| || || || ||||||||||| ||||| | ||| | ||||| | || ||| Sbjct 20067 GCAGGTTTTGTGCGAAGGTAGTACATTCCTGTTTTCAAACCCATTTTCCATGCATAGAAA 20008 Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135 || ||| | | ||| || | || || || | ||||||||| | || || ||| Sbjct 20007 TGAATAGATGACAATTTACCGTAGTTTGGTTCAGCAACATGGATATTAAAGGACTGGCTT 19948 Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195 |||||||| || || || ||||| |||||||||| ||| | || ||| | ||||||| Sbjct 19947 TGATCGATAAATGCACCTCTGTCGGCAGCCATTTGTATTGTAGTTTTTACAGAAATTTCC 19888 Query 62196 CAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAG-GTTTGTATTCT--GAATGGA 62251 || | ||||||||| || || |||| | |||| |||| | || || || |||| || Sbjct 19887 CAGACAGTTTTATACAAGTCTCTTATT-TCTTTAGGAATAGATTCAATGCTTTGAATAGA 19829 Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311 |||| || || || ||| || || || || | |||||| | || ||||| Sbjct 19828 TCCATTATTGTGGATTATAAGATTTTTCATATCTTCGTCCCATAAATCAGCTTCAGTTAA 19769 Query 62312 AAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 62370 | | | ||| || || |||| || ||||| || || || ||||| || | | || Sbjct 19768 ATCATGTAACAAG-TGATGATTCACCACTTGGAACTCACCCGACAAGACACGTCTTTGGT 19710 Query 62371 AAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62430 | || || ||| | ||||| | || |||||||||||||| || || || || || | Sbjct 19709 ATATGTTTGATGTAAAAGGTTCAAATGATTCATTATTTCCCAATATCTGTGCTGTGGAAG 19650 Query 62431 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATC 62488 |||| ||||||||||| | ||||| |||||||||||| ||||| || || || || Sbjct 19649 CAGTTGGCATAGGTGCTAGCAATAGTGAATTTCTAAGACC--ATGTTTTGCAATCTTCTC 19592 Query 62489 TTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 62548 |||||| | ||||| | ||| | ||| | || || | Sbjct 19591 TTTTAGTGAATCCCAGTCCCACAAATCTGTTGGGGTCTTGTTCCACATGTCATACTGCAA 19532 Query 62549 AATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAG 62608 ||||| | || || ||| |||| || || ||| ||| | |||||| |||| Sbjct 19531 TATACCTTGGCTTGCAGGGCTGCCTTCATAAGTCTCATATACTCCATGCTTCTCGGCTAA 19472 Query 62609 TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATC 62668 |||||| || ||||| | |||||| || || || ||||| || || | | ||||| || Sbjct 19471 TTCACAGCTAGCCTCCAGTGCACCATAGTAGATTGTTTCAAATATTTGTTGATTTA-ATT 19413 Query 62669 TTGT----GCTTCCAGGCTATCAAATGG-ATAAT--TTAAGAGAATAAACGCGTCCGCTA 62721 || | ||||| ||| ||| |||| || |||| || ||| || || |||| Sbjct 19412 TTATAGCAGCTTC---GCTTTCATATGGTATGCGCATTAA---AACAAAAGCATCAGCTA 19359 Query 62722 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62781 |||||||||| ||||| || || ||||| || ||| |||| || ||| || ||||| | Sbjct 19358 ATCCTTGAACTCCAATTCCAATGGGTCTGTGCCTCATATTTGATTTTTTTGCCTCTGGCA 19299 Query 62782 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACC-ACA 62840 || ||| | || | ||| |||||||| || ||||| || | || ||| | || Sbjct 19298 CTGGGTAAAAGTTCACATCAATAATTTTGTTCAGATT-CTCAGTTATAGTTTTAGTGACT 19240 Query 62841 TCCTTCAGTTTGAGAAAATCAAATCGCC---CATCTATTACAAACATGTTCAAGGCAACA 62897 || |||| ||||| ||||| || |||| |||||||||| || || |||| Sbjct 19239 TCTTTCAATTTGATAAAATTGTATGTTTTATCATCATTTACAAACATATTTAATGCAATT 19180 Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957 || || | ||| || || || || |||| || | ||||| || || ||||||||| Sbjct 19179 GAAGCTAAATTGCAGACAGCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAA 19120 Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017 || || || || || || || |||| ||| | || ||||| ||| |||| || | ||| Sbjct 19119 AGGTTGCTGCATTTAATGGTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCT 19060 Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077 |||||||| ||| |||| || || ||||||| || | ||| || || |||||||| | Sbjct 19059 TTATAAAGCATGTATGGTGTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAA 19000 Query 63078 ACTCGAGCCT----TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAA 63133 || |||| || || || | | |||| || || | ||| |||||| Sbjct 18999 ACCTGAGCTCGCACTTGTTTTACAAAGCGA---CCTTCCTGTT-CATATTTCTCATACAA 18944 Query 63134 TCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 63193 | ||| || || ||||||||| || | || ||||| || |||| |||||||| | Sbjct 18943 TGCTTCAAATTCTTCTCCCCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTAT 18884 Query 63194 CGACCACTCTCCGTCATCCTTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63252 ||| ||| | | | |||| ||| ||||||||| | ||| || ||||| | || Sbjct 18883 ACTCCAATCTTGATTA-CTTTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCAT 18825 Query 63253 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63312 ||| || || || | | ||| || || || ||||||||||| | ||| || || Sbjct 18824 AAAACAGTTCCCTAGCACGTACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATT 18765 Query 63313 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63372 | | || |||| |||||| |||||||| |||||||| | | ||||| | ||| || | Sbjct 18764 CAAATATGTCAGCATGCCATGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTAC 18705 Query 63373 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63432 |||| ||||| | ||| | || ||||| || |||||||| ||||| || | || ||| | Sbjct 18704 CTCCTTGATCGACGTAACGCGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCAT 18645 Query 63433 TTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATA 63492 | || | |||||| ||||| | ||||| | || ||| | |||| || | Sbjct 18644 TCGACACACCATTTGTACCAGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGA 18585 Query 63493 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATAC 63552 | || || || ||||| |||||| |||| ||| ||| |||||| || ||||| || | Sbjct 18584 GGCCAATCCCACCTGCTGATTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTC 18525 Query 63553 CCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 63612 | || || |||||||| ||||| | || || || ||||| ||| |||| | Sbjct 18524 CTTCAATACTATCATCTTTCATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGG 18465 Query 63613 TTCCCGCATTAAATAAG-GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671 | | || | | | ||| || || || || ||||| |||||||||| |||| |||| Sbjct 18464 TCGCTGC-TGAGAAAAGAGTTGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTG 18406 Query 63672 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63731 || || | ||||||| ||| ||||| |||||| || | | || | ||| | | Sbjct 18405 TATGTGTTAATAGCTCCGTCAATATCTTCACCATGAATGCCAATGGAAACCCTCATGAGC 18346 Query 63732 ATGTGCTGAGGTCTTTC 63748 |||||||| || ||||| Sbjct 18345 ATGTGCTGCGGCCTTTC 18329 >seq5451 Length=979821 Score = 84.2 bits (92), Expect = 3e-11 Identities = 244/375 (65%), Gaps = 3/375 (1%) Strand=Plus/Plus Query 156550 TTTCTGTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGG 156609 ||||| |||||||||| | || ||||| || ||| | || | || || | | || Sbjct 213638 TTTCTCTTATGACTCCTGTGCTACCAATGTTGGCTGAAGCTTGCAAATCAGTGGAAATGG 213697 Query 156610 CGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTAC 156669 | | ||||| | ||| |||||||| | ||| | ||||| || ||||||||||| | Sbjct 213698 CAATGAAAAAGTGTCCCAATGGAATGTTCTCAGAAATAAAATATGACGGTGAAAGAGTGC 213757 Query 156670 AAGTTCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCT 156729 |||| || ||||| || ||||| | || ||| | |||||||| | Sbjct 213758 AAGTGCACAAAAAAGGGAATGAGTTCAAATATTTCTCAAGAGCGTTAAAACCAGTTATGG 213817 Query 156730 CTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTA 156789 | || ||||| | || |||| || || ||||| |||| || ||||| |||| | Sbjct 213818 CACACAAAGTCAGTCATTTCAAGGATTATTTACCGCAAGCTTTCCCAAAAGGTACGGACA 213877 Query 156790 TCGTATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTCCCGTTTG 156846 | || ||||| ||||| || | | ||||| | ||| || || | || || | Sbjct 213878 TGATACTGGATGCTGAAGTTTTGATGGTAGATGTGAATACTGGGAAGCCATTGCCATTCG 213937 Query 156847 GAAGTTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGT 156906 | | ||||| |||| || | ||||| ||| | | | ||||| ||| | | | Sbjct 213938 GTACATTAGGTGTACATAAGCGGTCAGAATTCAAAGATGCACAAGTGTGTCTGTACATAT 213997 Query 156907 TTGACTGTTTGTACT 156921 ||||||||||||||| Sbjct 213998 TTGACTGTTTGTACT 214012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622271465811640